| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1302 |
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| Symbol | |
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| ID | 5109118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1460946 |
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| End bp | 1461839 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502528 |
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| Product | transporter DMT superfamily protein |
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| Protein accession | YP_001186799 |
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| Protein GI | 146306334 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.836717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.450959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTTGT CAGGCAGAGG GGTGGCGCTT TCGGTCGGCG CCTCGGTGCT GTTCGCGCTG
TTGCCGGGAT ACGTGCAGCT GCTGGCCCCG CTGGACGGCA TTCAGATCTT CGCCCAGCGC
GTGCTCTGGT CGATTCCCCT GGTGCTGTTG CTGGTGTTCC TGACCCGACA GGGCGCGCTG
CTGCGTGAGA CCTTCGCCCG TTTGCGCCGC GAGCCGCTGC TGGTGGCGGC CTGGCCCGTG
GCGGCCGTGC TGATCGGCGT GCAGTGGGGG CTGTTTCTCT GGGCGCCGCT GGCAGGGCGC
ATGCTGGAAG TGTCCATGGG CTACTTCCTG CTGCCCCTGG CCATGGTGCT GGCCGGCAGG
CTGTTCTACA ACGAACGCCT GCGCCCGCTG CAGCAGCTGG CGGTGGCTTG CGCCATGGTC
GGTGTGCTGC ACGAGCTCTG GCGCACCCAG GCGTTCTCCT GGCTGACGCT GGTCACCGCG
CTGGGCTATC CGCCGTATTT CATGTTGCGC CGCTGGATGC GCCTGGATGC CCTGTCCGGC
TTCGTGCTGG AAATGCTCAT GCTGGCGCCC CTGGCCATCT GGCTGATCGT CGCATACGGG
CCGGCCGGCG CCTTCGAGGG CAGGGCCGCG CTCTGGCTGC TGGTGCCCGG CATGGCGCTG
ATCGGCACCC TGGCGTTTGC CGCGATGATG GCCTCCAGCC GGCTGCTGCC AATGGGGCTG
TTCGGCATCC TCAGCTATGT CGAGCCGGTG CTGCTGTTCG CCGTGGCCCT GATGGTGCTG
GGCGAGAGCT TCGATGCCGG GCAATGGCTG ACTTACCTGC CAATCTGGCT GGCGGTGCTG
CTGGTGGGCT GGGACAGTGC CCGGCTGCTG CGCAAGCAGC AGCTCGAGCG CTGA
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| Protein sequence | MLLSGRGVAL SVGASVLFAL LPGYVQLLAP LDGIQIFAQR VLWSIPLVLL LVFLTRQGAL
LRETFARLRR EPLLVAAWPV AAVLIGVQWG LFLWAPLAGR MLEVSMGYFL LPLAMVLAGR
LFYNERLRPL QQLAVACAMV GVLHELWRTQ AFSWLTLVTA LGYPPYFMLR RWMRLDALSG
FVLEMLMLAP LAIWLIVAYG PAGAFEGRAA LWLLVPGMAL IGTLAFAAMM ASSRLLPMGL
FGILSYVEPV LLFAVALMVL GESFDAGQWL TYLPIWLAVL LVGWDSARLL RKQQLER
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