| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1301 |
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| Symbol | |
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| ID | 5109117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1460074 |
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| End bp | 1460946 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502527 |
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| Product | carboxylate/amino acid/amine transporter |
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| Protein accession | YP_001186798 |
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| Protein GI | 146306333 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00950] Carboxylate/Amino Acid/Amine Transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.546965 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTATC TGCTGATCGT CACCCTGCTG TGGGCTTTTT CCTTCAGCCT GATCGGTGAG
TATCTGGCTG GCAGGGTAGA TAGTTACTTC GCCGTGCTGA CGCGCATCGT CATCGCCGGC
CTGCTGTTCG TACCGCTGAC CCGCTGGCGC GGTCATGCGC CGGCCTTCGT GCGCGGCATG
CTGGTCATCG GTGCCTTGCA GTTCGGCATC ACCTACGTCT GCCTGTACCT GAGCTTCTCG
GTGCTGAGCG TGCCGGAGGT ATTGCTGTTC ACCATTCTCA CGCCGTTGCA CGTGACCCTG
ATCGAGGATG CGCTGAACCG CCGTTTCAAC CCCTGGGCGC TGGTGGCGGC CGCGGTGGCG
GTGCTGGGCG CCGGGATCAT TCGCTACGAC GGCATCAGCA GCGGCTTTCT GCTCGGCTTT
CTGTTGCTGC AGGTGGCCAA CTTCACCTTC GCTGCCGGTC AGGTGCTGTA CAAGCACCTG
CTGCTGCGGC ATCCCTCGGA CGAGCCGCAG TATCGACGCT TCGGCTTCTT CTATCTCGGC
GCGCTGCTGG TGGCGCTGCC TGCCTTCCTG CTGCTGGGCA ATGCCGAGCG CCTGCCGGTC
ACCCCGCTGC AGTGGGGTGT GCTCGGCTGG CTGGGCGTGG TGGCGTCCGG CCTGGGGCTG
TACTGGTGGA ACAAGGGCGC CAGCCTGGTG GATGGCGGCA CGCTGGCGGT GATGAACAAT
GCGCTGGTGC CGGCCGGTCT GCTGGTCAAC CTGCTGTTGT GGAACCATGA TGCCGACCTG
CTGCGCCTGG CGCTGGGCGG CGCGGTGATC GCCGCGTCGC TGCCTTTGCT GAAGCTTGGC
CAGGCGCGTC GCGTGCGCGG CGAGGTGTTC TGA
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| Protein sequence | MRYLLIVTLL WAFSFSLIGE YLAGRVDSYF AVLTRIVIAG LLFVPLTRWR GHAPAFVRGM
LVIGALQFGI TYVCLYLSFS VLSVPEVLLF TILTPLHVTL IEDALNRRFN PWALVAAAVA
VLGAGIIRYD GISSGFLLGF LLLQVANFTF AAGQVLYKHL LLRHPSDEPQ YRRFGFFYLG
ALLVALPAFL LLGNAERLPV TPLQWGVLGW LGVVASGLGL YWWNKGASLV DGGTLAVMNN
ALVPAGLLVN LLLWNHDADL LRLALGGAVI AASLPLLKLG QARRVRGEVF
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