Gene Pmen_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1293 
Symbol 
ID5109109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1453744 
End bp1454571 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content62% 
IMG OID640502519 
Productoxidoreductase FAD/NAD(P)-binding subunit 
Protein accessionYP_001186790 
Protein GI146306325 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCA ATCGCGTCTT CAGGCGCCCG ATTCTCGAGG AAGTCATCAT GAGCAATATG 
AACGTCGAGC GCGTGCTCAG CGTCCACCAC TGGAACGATA CGCTGTTCAG CTTCAAGTGC
ACCCGTGATC CGGGTCTGCG CTTCGAGAAT GGCCAGTTCG TGATGATCGG CCTGCAGCAG
GACAACGGCC GCCCGCTGAT GCGCGCCTAC TCCATCGCCA GCCCGAACTG GGAAGAGCAT
CTGGAGTTCT TCAGCATCAA GGTGCCGGAC GGCCCGCTGA CCTCGCAGCT GCAGCACCTC
AAGGAAGGCG ACGAGATCAT CATCAGCAAG AAGCCCACCG GCACCCTGGT GCTCGATGAC
CTCAACCCGG GCAAGCATCT GTATCTGCTG TCCACCGGCA CCGGTCTGGC GCCGTTCATG
AGCGTGATCC AGGACCCGGA AACCTACGAG CGCTTCGAGA AGGTGATCCT GGTGCACGGC
GTGCGCTACG TGAACGAGGT GGCCTACCGC GAGTTCATCA CCGAGCACCT GCCGCGCAAC
GAATTCTTCG GCGATGCGCT GAAGGAGAAG CTGATCTACT ACCCGACCGT GACCCGCGAG
CCGTTCGAGA ATCAGGGCCG TCTGACCGAC CTGATGCGCA GCGGCAAGCT GTTCGCCGAC
ATCGGCCTGC CGCCGATCAA CCCGCAGGAC GACCGTGCCA TGATCTGCGG CAGCCCGAGC
ATGCTCGACG AGACCAGCGC AGTGCTCGAC AGCTTCGGTC TGAAGATCTC CCCGCGCATG
CGTGAGCCGG GGGATTACCT GATCGAGCGT GCCTTCGTCG AGAAATAA
 
Protein sequence
MPRNRVFRRP ILEEVIMSNM NVERVLSVHH WNDTLFSFKC TRDPGLRFEN GQFVMIGLQQ 
DNGRPLMRAY SIASPNWEEH LEFFSIKVPD GPLTSQLQHL KEGDEIIISK KPTGTLVLDD
LNPGKHLYLL STGTGLAPFM SVIQDPETYE RFEKVILVHG VRYVNEVAYR EFITEHLPRN
EFFGDALKEK LIYYPTVTRE PFENQGRLTD LMRSGKLFAD IGLPPINPQD DRAMICGSPS
MLDETSAVLD SFGLKISPRM REPGDYLIER AFVEK