| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1290 |
|---|
| Symbol | |
|---|
| ID | 5109106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 1450943 |
|---|
| End bp | 1451914 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640502516 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001186787 |
|---|
| Protein GI | 146306322 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTTTGCG GCAGCATGCG CTGCTTTTCC AGCCGAGTTC GTTCCATGCG AAGCCAAGCC
CTGCGCGCCG ACCTGTTGAT GCTGATTACC GCGATGATCT GGGGCAGCGC CTTTGTCGCC
CAGCGCCTGG GCATGGACAG CATCGGCCCC TTTCTCTATA CCGGTCTGCG TTTCGCCCTG
GCCTGCCTCA TACTGCTGCC ACTGCTGGCC CTGCTGCAAC GACGCAGCCA GCGCCCGGCG
GCGCCCCTGA ACCGCGGCCT GCTGCTGGGC GGCGTGGTGA TGGGCCTGGC GCTGTCGCTG
GGGATCAACC TGCAGCAGGT GGGTCTGCTG TTCACCACCG TGACCAATTC CGGCTTCATC
ACCGGCCTGT ACGTCATCGT AGTGCCGATC CTCGGCCTGC TGATCGGCCA GCGCAGCAGT
GCCGGCATCT GGCTGGGCGC CTGCCTCGCG GTGCTGGGGA TGTTCCTGCT CAGCGTCGGC
GAAGGCTTTA CCGTGGCCTC GGGCGACTGG CTGCAACTGG CCGGCGCCTT CGTCTGGGGC
GTGCACGTGC TGCTGGTGGG GTTCTTCGCC AGCCGCCACG ACCCGCTGCG CCTGGCGCTG
ATCCAGTTCG TCACCTGTGC GGTGATCAGC CTGCTGCTGG CGCTGGTGTT CGAGACGGCC
ACGCTCGACG GCATCATCGC CGCGGGGCCA GCCATTCTCT ATGGCGGCCT GTTCGGCGTG
GCCATCGGCT TCACCCTGCA GGTGGTGGCG CAGCAGCACG CCATCGCCTC GCACGCGGCG
ATCATTCTTT CGCTGGAGGC GGTGTTCGCC GCCATCGCCG GCGCCCTGCT GCTCGGCGAA
GTGCTGGCCC TGCGCGGCTA TCTGGGCTGC GCGCTGATGT TCGCCGGCAT GCTGCTGGCC
CAGCTATGGC CCAAGCCCTT GCCAAGCGAG CTCAGCGGTA CGATTGCAAG CGCTGATGCA
GGGCGTCGTT GA
|
|---|
| Protein sequence | MLCGSMRCFS SRVRSMRSQA LRADLLMLIT AMIWGSAFVA QRLGMDSIGP FLYTGLRFAL
ACLILLPLLA LLQRRSQRPA APLNRGLLLG GVVMGLALSL GINLQQVGLL FTTVTNSGFI
TGLYVIVVPI LGLLIGQRSS AGIWLGACLA VLGMFLLSVG EGFTVASGDW LQLAGAFVWG
VHVLLVGFFA SRHDPLRLAL IQFVTCAVIS LLLALVFETA TLDGIIAAGP AILYGGLFGV
AIGFTLQVVA QQHAIASHAA IILSLEAVFA AIAGALLLGE VLALRGYLGC ALMFAGMLLA
QLWPKPLPSE LSGTIASADA GRR
|
|---|
| |