| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1239 |
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| Symbol | |
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| ID | 5108740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1400396 |
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| End bp | 1401166 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502464 |
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| Product | VacJ family lipoprotein |
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| Protein accession | YP_001186736 |
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| Protein GI | 146306271 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.530475 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTAAGC ACAGCACTCT CCTCATCGCC CTGCTGCTGG CCAGCGGGCC GGCGCTGGCC
GATCGGCAGG TCGATGCCGA CGGTTTCACC AACCCGCTGC AGAACCTGAA CTTCAACCCC
GGGCTCGATC AGCAGGAATT CGAACGTGCC TCCAACGATG CGCTGCAGGT CTACGACCCG
CTCGAGTCGT GGAACCGCCG CATCTATCAC TTCAACTACC GCTTCGATCA GTGGGTATTC
CTGCCGGTGG TGGATGGCTA CCGCTATATC ACCCCGGACC TGGTGGAAAC CGGCGTCCAC
AATTTCTTCA GCAACCTCGG CGAAGTGCCC ACCCTGGCCA ACAGCCTGCT GCAGCTCAAG
GGCAAGCGCG CAATGAACAG CACCGCGCGC CTGCTGTTCA ATACCATCCT CGGCGTAGGC
GGCCTCTGGG ATCCGGCGAC CCACATGGGC CTGCCCAAGG TGCGCGAGGA TTTCGGCCAG
ACTCTGGGCC ACTATGGCGT CCCCGCCGGG CCCTACCTGA TGCTGCCGCT GCTGGGCCCC
TCCAACCTGC GCGACACCAC GGGTCTGGTG GCCGACTATG GCCTGGCCAC GGCGGTCAAC
TACCTTGACG TGGCCGAGGC CAGCCGCGCC AACCCCGGCA TCACCCTGCT GGACGTGGTG
GACCAGCGCG CGCACACCAA CTTCCGCTAC GGCCAGCTCA ACTCACCGTT CGAGTACGAG
AAGATTCGCT ACTTCTATCA TGAGTCGCGC AAGCTGAAGA TCGCCGACTG A
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| Protein sequence | MAKHSTLLIA LLLASGPALA DRQVDADGFT NPLQNLNFNP GLDQQEFERA SNDALQVYDP
LESWNRRIYH FNYRFDQWVF LPVVDGYRYI TPDLVETGVH NFFSNLGEVP TLANSLLQLK
GKRAMNSTAR LLFNTILGVG GLWDPATHMG LPKVREDFGQ TLGHYGVPAG PYLMLPLLGP
SNLRDTTGLV ADYGLATAVN YLDVAEASRA NPGITLLDVV DQRAHTNFRY GQLNSPFEYE
KIRYFYHESR KLKIAD
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