4 homologs were found in PanDaTox collection
for query gene Pmen_1172 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009439  Pmen_1172  hypothetical protein  100 
 
 
87 aa  177  4.999999999999999e-44  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00969816  normal  0.805859 
 
 
-
 
NC_002947  PP_1439  hypothetical protein  40.91 
 
 
67 aa  40.8  0.007  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4282  hypothetical protein  40.91 
 
 
67 aa  40.8  0.007  Pseudomonas putida F1  Bacteria  normal  0.0814307  normal 
 
 
-
 
NC_010322  PputGB1_4368  hypothetical protein  40.91 
 
 
67 aa  40.8  0.007  Pseudomonas putida GB-1  Bacteria  normal  normal  0.0667372 
 
 
-
 
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