| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1156 |
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| Symbol | |
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| ID | 5108129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1302768 |
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| End bp | 1303706 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640502380 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001186655 |
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| Protein GI | 146306190 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.203658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.697323 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGAACG CCGGATTGAA TCTCGAAGAC CTGCAAACAT TTGTTGAGGT CGCTGATGCT
GGCGGAATCT CAGCCGCCGC ACGCCACCTT GGAGTTTCCA AATCAATCGT CAGTCGGCGA
CTGTTCCGAC TGGAAGCGGA CCTTGGCATT CAGCTTCTCG CACGAACCAC CCGCGGTGCG
GCACTTACAG AAGCGGGTAT GACATTTCGG GAACATGCGG CCCGAGCCAG TGCCGAGATT
GAGACGGCCA GGGAAACGAT TCTTCCCACC GGGGATCTTC GTGGTCGATT GCGGGTCGCA
GTGCCGCTTT CCTCCGGCCC GATACACTTT GCCCCTGTGC TTGCTGAGAT GGCACGCCGC
TACCCTCGCC TTCAGATTGA TGCGGCCTAC GGAGATCGCT TCGTCGACCT GGTCGCGGAA
GGCTTCGATT GTGCCATCCG GGTCGGAGCC CTACGCGACT CGAACCTGCT GGCCAAACGC
GTGGGCCAGA TTTACGGCAA GCTCGTCGCC AGCCCGGACT ACATCAAGGC ACATGGAGCA
CCCGAGACGC CGGACGAAAT CGCCGCCCAT CAGGCGTTGC TCGGCGCCGA AAGTTGGCGC
TTCATGGATG GAAACAAGGT CATCACCGTG CAGCCGCAGG GACGCTTCAA GAGCGATAAC
GGCGCGGCGC TCGCCGGTGC TGCGGCAGCC GGGCTCGGTA TTGCCTGGCT CCCCGATTGT
GTCACTTACG AATATCTGGC GTCCGGTGCA CTCGTTCCGA TCATGACTCG CTATCCACTG
CCAGTAGGGG ACGTTTACAT CGTGCGGCCG CCCAGCGCGC ACCCAGCGCA AAAAGTGCGC
ATCCTCTCGG AGTTGCTGAT CGAATCATTT GAAAGTAATC CGCCGTTTAC AGATGCGATG
GCCAAGGTTG CAGCGACACG CAACCTTACG CCTGGCTGA
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| Protein sequence | MGNAGLNLED LQTFVEVADA GGISAAARHL GVSKSIVSRR LFRLEADLGI QLLARTTRGA
ALTEAGMTFR EHAARASAEI ETARETILPT GDLRGRLRVA VPLSSGPIHF APVLAEMARR
YPRLQIDAAY GDRFVDLVAE GFDCAIRVGA LRDSNLLAKR VGQIYGKLVA SPDYIKAHGA
PETPDEIAAH QALLGAESWR FMDGNKVITV QPQGRFKSDN GAALAGAAAA GLGIAWLPDC
VTYEYLASGA LVPIMTRYPL PVGDVYIVRP PSAHPAQKVR ILSELLIESF ESNPPFTDAM
AKVAATRNLT PG
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