Gene Pmen_1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1086 
Symbol 
ID5108059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1222697 
End bp1223170 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content72% 
IMG OID640502310 
Productwater stress/hypersensitive response protein 
Protein accessionYP_001186585 
Protein GI146306120 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.605963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGCC TGCTTCGTCT GTGTTTCGTC GTCCTGCTCG CCGCTGCGCT GGGTGCCTGC 
GCCAGTTTCA CCGAGCGCGA CCCGCTGCGT ATCGACCTGG TCGGCCTGGA GCCCCTGCCC
GGCCAGGGCC TGGAGGTACG CTTCGCGGTC AAGCTGCGGG TGCAGAACCC CAACGACCGT
GCAGTGGACT TCAACGGCGT GGCGCTGGAT CTGGAGGTCA ACGGCCGGCC GCTGGCCAGC
GGGGTGAGCG ACCAGCGTGG CAGCGTGCCG CGTTTCGGCG AAACCCTGGC CAGCGTGCCG
GTGAGCATTT CCGCCTTCTC GGCCATGCGC CAGGCCTGGG GCGCCAGCGG CTACCAGCCG
GGCCAGGGCC TGCCCTACGT GCTGCGCGGC AAGCTGGCCG GCGGCCTGTT CGGCTCCCGC
CGCTTCAGCG ACAGCGGCAC CCTGGACTGG CCGGAGCCGC CACGCGGCTA CTGA
 
Protein sequence
MPRLLRLCFV VLLAAALGAC ASFTERDPLR IDLVGLEPLP GQGLEVRFAV KLRVQNPNDR 
AVDFNGVALD LEVNGRPLAS GVSDQRGSVP RFGETLASVP VSISAFSAMR QAWGASGYQP
GQGLPYVLRG KLAGGLFGSR RFSDSGTLDW PEPPRGY