| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1053 |
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| Symbol | |
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| ID | 5107712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1191106 |
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| End bp | 1191696 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502275 |
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| Product | peptidyl-tRNA hydrolase |
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| Protein accession | YP_001186552 |
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| Protein GI | 146306087 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0193] Peptidyl-tRNA hydrolase |
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| TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.114072 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCG TACAACTGAT CGTTGGCCTG GGTAACCCCG GCCCCGAATA CGACCAGACC
CGGCACAATG CAGGGGCCCT TTTCGTTGAG CGCGTGGCCG AGAGCCAGCG CGTCAACCTT
GCTGTCGATC GCAAGTATTT CGGCCTGGTG GGCAAGTTCA ACCACCAGGG GCGCGAAGTT
CGTCTGCTCA TCCCCACCAC CTACATGAAC CGCAGCGGCC AGTCCGTGGC GGCCTTGGCC
AATTTCTTCA AGATCAAACC CGAAGAGATC CTGGTGGCCC ACGACGAACT CGACATGCCA
CCCGGCGTCG CCAAGCTCAA GCAGGGCGGC GGCCACGGCG GACACAACGG CCTGCGCGAC
ATCATCTCCC AGCTCGGCAA CCAGAATAAC TTCCATCGCC TGCGGCTCGG CATCGGCCAC
CCGGGGCACG CCAGCCTGGT CTCCGGCTAC GTGCTCGGAC GCGCCCCACG CAGCGAACAG
GAACTGCTCG ATCAGAGCAT CGACTTCGCC TTGGACGTCC TGCCGGAAAT ACTCGCCGGC
GACTGGACCG TGGCCATGCG CAAACTGCAT AGCCAGAAGG CCACCAAGTA A
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| Protein sequence | MTAVQLIVGL GNPGPEYDQT RHNAGALFVE RVAESQRVNL AVDRKYFGLV GKFNHQGREV
RLLIPTTYMN RSGQSVAALA NFFKIKPEEI LVAHDELDMP PGVAKLKQGG GHGGHNGLRD
IISQLGNQNN FHRLRLGIGH PGHASLVSGY VLGRAPRSEQ ELLDQSIDFA LDVLPEILAG
DWTVAMRKLH SQKATK
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