| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1030 |
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| Symbol | |
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| ID | 5108652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1167267 |
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| End bp | 1168748 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502252 |
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| Product | hypothetical protein |
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| Protein accession | YP_001186530 |
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| Protein GI | 146306065 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGC TCAAGAACGG CCTCAACCAA GCCAGCGGCT GGCTGCTGTA CCTCAGCCTG
CTGATGCTGC TGGCGCTGGC GCTGCCCCGC TCGGTGTTCG ACCCCGAGTC GCGGCACTTC
CTGCTGCTGA TCGGCATCGT CGGCATCTGG CGTTATTCCA TGGGCGCCAT GCATTTCGTG
CGTGGCTGCC TGTTCCTCTA CCTGGTTTAT CCCTGGTATC GCCGCAAGGT GAAAAAACTC
GGCAAGGACG CCGACCCCTC TCATGTGTAT CTGCTGGTCA CCAGCTTCCG CATCGAGGCG
CTGACCACCG CCATGGTCTA CCGCTCGGTG ATTCGCGAAG CCATCGACTG CGGCTACCCG
AGCACCCTGG TGTGCTCCAT CGTCGAGCTC TCCGACGAGT TGCTGATCAA GAACCTCTGG
GCCCAGGCCC AGCCGCCGGA ACACGTCAAG CTGGACATCG TGCGCATCCC CGGCACCGGC
AAGCGCGACG GTCTGGCCCA CGGTTTCCGC GCCATTTCCC GGCAGATGCC GGATCGTGAC
GCGGTGGTGG CGGTGATCGA CGGCGACACC GTGCTCGAGC CCGGCGTGGT GCGCAAGAGC
GTGCCCTGGT TCAAGCTCTT CCCCAATGTC GGCGGGCTCA CCACCAACGA GTTCTGCGAG
GTGCGCGGCA GCTACATGAT GAGCGAGTGG CACAAGCTGC GCTTCGCTCA GCGCCACCTC
AACATGTGCT CGATGGCCCT CTCCAAGCGC GTGCTGACCA TGACCGGGCG CATGTCGGTG
TTCCGCGCCA GCGTGGTGAC CGACCCCGAG TTCATCCGCG ACGTGGAAAG CGACCACCTG
GAGCACTGGC GTCTAGGCCG CTTCCAGTTC CTCACCGGCG ACGACAAGTC CAGCTGGTAC
AGCCTGATGC GCCTGGGCTA CGACACCTTC TACGTGCCCG ATGCGGCGAT CAACACGGTC
GAGCATCCGC CGGAGAAGAG CTTCATCAAG GCCAGCCGCA AGCTGATGTT CCGCTGGTAC
GGCAACAACC TGCGGCAGAA CTCGCGGGCC CTGCGCCTGG GCTTCGGTCG CCTCGGTGCC
TTCACCACCC TGGTGCTGTT CGACCAGCGC GTGTCGATGT GGACCTGCCT GCTGGGCCTG
TGCGTGGCGA TCATCGCCAG CCTCAAGTAC AGCGTGATGT ACCTGCTGAT CTACCTGCTG
TGGATCGGCT GCACGCGCCT GATCCTGACG CTGCTGCTGA TGCTCTCCGG GCACCGCATC
GGCCCGGCCT ACCCGGCGCT GCTCTATTAC AACCAGATCG TCGGCGCCCT GGTGAAGATC
TACGTGTTCT TCCGCCTCGA CCAGCAATCC TGGACGCGCC AGAACACCAA GCTCAACCGC
GGCCTGTCCA GCTTCGCCAA CTGGTTCAAC AGCTGGTCGT CGCGCGCCAT GACCTTCTCT
GCCTCCTGTG TCTTCATCGC CGCGCTGCTG GCGCTGGTGT GA
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| Protein sequence | MDKLKNGLNQ ASGWLLYLSL LMLLALALPR SVFDPESRHF LLLIGIVGIW RYSMGAMHFV
RGCLFLYLVY PWYRRKVKKL GKDADPSHVY LLVTSFRIEA LTTAMVYRSV IREAIDCGYP
STLVCSIVEL SDELLIKNLW AQAQPPEHVK LDIVRIPGTG KRDGLAHGFR AISRQMPDRD
AVVAVIDGDT VLEPGVVRKS VPWFKLFPNV GGLTTNEFCE VRGSYMMSEW HKLRFAQRHL
NMCSMALSKR VLTMTGRMSV FRASVVTDPE FIRDVESDHL EHWRLGRFQF LTGDDKSSWY
SLMRLGYDTF YVPDAAINTV EHPPEKSFIK ASRKLMFRWY GNNLRQNSRA LRLGFGRLGA
FTTLVLFDQR VSMWTCLLGL CVAIIASLKY SVMYLLIYLL WIGCTRLILT LLLMLSGHRI
GPAYPALLYY NQIVGALVKI YVFFRLDQQS WTRQNTKLNR GLSSFANWFN SWSSRAMTFS
ASCVFIAALL ALV
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