Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1025 |
Symbol | |
ID | 5108647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1160247 |
End bp | 1161677 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640502247 |
Product | hypothetical protein |
Protein accession | YP_001186525 |
Protein GI | 146306060 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCCAT CGCCCTTCAA ATCCCTTTCC CTGGCCATTG CCTGCGCACT GGCCAGCACC GCCCTGCAGG CGCAGGAGCG CCAGGCGCCG GAATATCAGG TCGAGGACTG CTGCTCGCTG TGCCCGGCCG CCCACGACGC CAGCCTGTAC ACCACCAACT ACATGAAGAA CTTCATCACC CTGCTCGATG CCGAGGAAGG CTGGCTGTTC CGCAGCGTGG AAGACCTGCG CACCGAGTTC GGCACCAGCG AGATCGGCTA CCAGCGCCTC AAGGAGCTGC GCGACGGGCT CAAGCAGCGC GGCGTCGAGC TGGTGGTGGT CTATCAACCG ACCCGCGGCC TGGTCAATCG CAACAAGCTG TCGCCGGCCG ACTACCAGCG CTTCGACTAC GACAAGGCGC TGCGCAACTA TCGCCAGGCG CTGACGCGCT TCGAGCAGCT GGGCATCTGG GTGCCGGACC TGACGCCGCT GGCCGACGAG AACAGCGACA AGGAGTTCTA CTTCCGCCGC GACCAGCACT GGACGCCCTA CGGCGCCGAA CGCACCGCAC GCCTGGTGGC CGAGACGGTC AAGCGCATCC CCGGCTTCGA GGATATCCCG CGCAAGGAGT TCGTCACCGA GCGCATCGGC CTGATGGGCA AGACCGGCAC CATGCAGAAC GTCGCCAGCC AGCTGTGCGG CACCAGCTAC GCGGTGCAGT ACGTCGACCA GTTCGTCACC GAGCCCAAGG ACGCCAGCGA CGGCGACGCC CTGTTCGGTG ACGAGAGCAG CCCGCGCATC ACCCTGATCG GTACCAGCCA CAGCGGCAAG AACTACAACT TCGGCGGTTT CCTCGAAGAG TACCTGGGCA CCGATATCCT CAACGCGGCC TTCCCCGGCG GCGGTCTGGA GGGCGCGATG CTCGAGTACC TGGCCAGCGA TGCCTTCCAG AACGATCCGC CGCAGATCCT CATCTGGGAG TTCTCGCCGC TCTACGACCT GGCCTCGGAC CGCATCCACC GCCAGCTGAT GGCGTCCCTG AACAACGGCT GCAGCGGCCA GAACCAGGTG CTCAGCAAGG AAACGCGCCT GCGCCCGGGC AGCAACGAGG TGCTGGTCAA CGGCGAGAAC AACCTGCTGA CCCTGGCCGG CAATCGTCAC CAGCTGGATC TGCAGTTCAG CGATCCGTCG GTCAAGCGCG TGGACGCCAC CATCTGGTAC CTCAACGGCC GCCGCGAGCA GCTCAAGCTG GAGAAACCGC ACACCGTCGA CACCGACGGC CGCTTCGCCG TGGAACTGCG CGACGAGCCG GGCTGGGGCG AGCAGAACTT CTTCGCCCTG GAAATCGAAA AGCCCGAGGA CAGTGCCGAC GACCTGAAAG TGCAGGCCAG CCTGTGCCAG CGCCCGAACG ATGCCGGCCA GCAGGTCGCG CAGCGCACCG CGGGCAACTG A
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Protein sequence | MIPSPFKSLS LAIACALAST ALQAQERQAP EYQVEDCCSL CPAAHDASLY TTNYMKNFIT LLDAEEGWLF RSVEDLRTEF GTSEIGYQRL KELRDGLKQR GVELVVVYQP TRGLVNRNKL SPADYQRFDY DKALRNYRQA LTRFEQLGIW VPDLTPLADE NSDKEFYFRR DQHWTPYGAE RTARLVAETV KRIPGFEDIP RKEFVTERIG LMGKTGTMQN VASQLCGTSY AVQYVDQFVT EPKDASDGDA LFGDESSPRI TLIGTSHSGK NYNFGGFLEE YLGTDILNAA FPGGGLEGAM LEYLASDAFQ NDPPQILIWE FSPLYDLASD RIHRQLMASL NNGCSGQNQV LSKETRLRPG SNEVLVNGEN NLLTLAGNRH QLDLQFSDPS VKRVDATIWY LNGRREQLKL EKPHTVDTDG RFAVELRDEP GWGEQNFFAL EIEKPEDSAD DLKVQASLCQ RPNDAGQQVA QRTAGN
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