| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0911 |
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| Symbol | |
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| ID | 5108769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1028302 |
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| End bp | 1030110 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640502127 |
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| Product | LppC family lipoprotein |
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| Protein accession | YP_001186411 |
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| Protein GI | 146305946 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3107] Putative lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.217114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCTA GCCTGCGCCC TCTCTCCGCC CTTTGCCTGG CCGGCCTGCT CGCCGCCTGC
GCCAGCTCGC CTTCCAACAA TCTGGGCCAG CTGCCACGCA CCCCGCAAGC CAGCATCGAG
CAGATGCTCC AGCAGGCCGC CGAGAGCAAA CCGGAACAGG CTGCGCTGCT GCGCCTGTCC
GCGGCCGATC AGGCCTACAA GCAGAAGGAC ATGGCCCGCG CCGCGCGCAT TCTGGAACAG
ATCGATATCG CCAGCCTGCA ACCGGCGCAA CAGATCTTCG CCAGCACCCT GAAAGCGGAA
CTGGCGATGG CGCGCAAGCA GCCCAAGAGC GCCCTGCAGG CCCTGCAGCA CCCCAGCCTT
GAGCGCCTTG CCGAGCTGCC GGTGGAGCAG CAGATTCGCA CCCAGCTGGT CCGCGCCCGC
GCCCTCGAAG CCGACGGTCA GGCACTCGCC GCCGCGCGCG AGCGCGTCTT CATCGCGCCT
CTGCTGAGCG GTCAGACCGC TCGCGACAAC CACGAGAACA TCTGGGCACT GGTCTCCACC
CTGCCGGCAC AAACCTCGGC CGGCGCCGAC AGCGACCTGG CCGGATGGCT GGAACTGGCC
CGAGTGACCA AAAGCAGCGC CACCCTGGAA CAGCAGCAGG CCGCCATCGA CCAGTGGGTA
GCGCAGAATC CGCAACACCC TGCCGCCGAA CAGCTGCCAG AAGCGCTGGG CAAGCTGCGC
GAACTGGCCA GCCAGCCGCT GAACCGCGTC GCCCTGCTGC TCCCGCAGGA GGGCCAGCTG
GCCAGCGTCG CACGCGCCCT GCGCGATGGC TTCCTGGCCG CTCATTACGA AGCTCAGCAG
GCCGGGCAGA ACCCGCCGGA AATCAAGCTC TACGACAGCG CGCGCATCGG CTCGCTGGAC
GCCTTCTACC AGCAGGCCCA GGCCGATGGC GTGCAACTGG TGGTCGGGCC GCTGGAAAAG
CCCCTGGTCA AACAGCTCAG TGACCGCGAG CAGCTGCCCA TCACCACCCT GGCGCTGAAT
TACAGCGATG CCGGCCAGGA AGGCCCGGCG CAGCTGTTCC AGTTCGGCCT GGCCGCCGAG
GACGAGGCTC GCGAAGTCGC CCGCCGCGCC TGGAACGACG GCATGCGCCG TGCCGTGGCT
CTGGTGCCGC GCGGCGAATG GGGCGATCGC GTGCTCGATG CCTTCCGCCA GAACTGGCAG
GCCCAGGGCG GCACCCTGAT CGCCGCCGAA CGCGTCGACC AGCCGGTGGA GCTGGCCCGG
CAGATCGCCG AGCTGTTCCA GCTGCGCGAG AGCGAGGCAC GCGCCCGTCG CCTGCAGAAC
ACCCTGGGCA CCAGCCTGGA CGCACAACCG GCACGCCGCC AGGACGTCGA CTTCATCTTC
CTTGCGGCCA CTCCGCAGCA GGCTCAGCAG ATCAAACCGA CCCTGGCCTT CCAGTACGCC
GGCGACGTGC CGGTGTACGC CACCTCCCAC CTGTTCACCG GCGCCCACAG CCAGGCGCAG
TATCAGGACC TGGAAGGCAT TCGCTTCTGC GAAACGCCCT GGCTGCTGGA CGCCCACGCC
CCGCTGCGCC AGCAGGTCAG CAACCAGTGG CCGCAGGCCG GCGGCAGCCT CGGCCGGCTG
TACGCCATGG GCGTTGATGC CTATCGCCTG GCACCGCGCC TGGGCCAGCT CAAGGCGCTG
CCGGATTCGC GCATCGACGG CCTGTCGGGC AGCCTCAGCC TCAACGCCAC GCAACGCATC
GAGCGCCAGC TGCCCTGGGC GGAGTTCCGC GGCGGTCAGG TCCAGCGCCT CCCCGACAGC
CTCAATTGA
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| Protein sequence | MIASLRPLSA LCLAGLLAAC ASSPSNNLGQ LPRTPQASIE QMLQQAAESK PEQAALLRLS
AADQAYKQKD MARAARILEQ IDIASLQPAQ QIFASTLKAE LAMARKQPKS ALQALQHPSL
ERLAELPVEQ QIRTQLVRAR ALEADGQALA AARERVFIAP LLSGQTARDN HENIWALVST
LPAQTSAGAD SDLAGWLELA RVTKSSATLE QQQAAIDQWV AQNPQHPAAE QLPEALGKLR
ELASQPLNRV ALLLPQEGQL ASVARALRDG FLAAHYEAQQ AGQNPPEIKL YDSARIGSLD
AFYQQAQADG VQLVVGPLEK PLVKQLSDRE QLPITTLALN YSDAGQEGPA QLFQFGLAAE
DEAREVARRA WNDGMRRAVA LVPRGEWGDR VLDAFRQNWQ AQGGTLIAAE RVDQPVELAR
QIAELFQLRE SEARARRLQN TLGTSLDAQP ARRQDVDFIF LAATPQQAQQ IKPTLAFQYA
GDVPVYATSH LFTGAHSQAQ YQDLEGIRFC ETPWLLDAHA PLRQQVSNQW PQAGGSLGRL
YAMGVDAYRL APRLGQLKAL PDSRIDGLSG SLSLNATQRI ERQLPWAEFR GGQVQRLPDS
LN
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