Gene Pmen_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0896 
Symbol 
ID5108754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1016386 
End bp1017348 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content65% 
IMG OID640502112 
Producthypothetical protein 
Protein accessionYP_001186396 
Protein GI146305931 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGTC TACTGATTGC CCTGCTTGCC ACCTGCAGCC TCAGCGCTGC CGCGGCCGAC 
AACTGGAAAC CCTTCCCGCT CGACCAGAGC GCCTACGACT ACAGCGGCGA CAAGCTGCGT
CAGGCCTGGC CGCAGCTGAC CCGCGGCTTC GGCGACTATC CCTTCCCCGA CGCCGACTGG
GTGGTGAACA TGGCCACCCG CCATCCGCAG GCGCTGGAGA AGACCGTGGC AGCCGGCACC
GGCTTTACCG GCCAGCCGGA AGAGGCCGAG ATCTATGCCC AGAAACTGCA GGACGTCTGG
CGCCTGATGT TCCGCGGCGA TTTCGCCCAG GCCAAGGAAC AGGGTCTGGC GCTCGGCGTC
GGCGGCCAGG TCCCGGCCAT GTTCGCCCAG GTCATCTACG CCATGTTCCT GGTACCGGAC
CAGGCCGAGA AGCATCGCCT GCTGGAAGAA GTGATTGCCT ATACCGACGA AGCCGGCGAA
CTGGTGCAAG CTGATACCGT CGCGCAGTTC GGCCGCGTCT ACGCCAAGGC GCGCCTGGGC
GAGGAACTGT CGGTGCCGGT GGTGCTCAAG CGCGGCTATA CCACGCAGAT TCCCAATGAG
CTCAAGGCCC TGCTGGCCAA GCAGCCGCAG CAGCCGTTCG CCCTGGCGCT GTACGGCGGT
TATGAAGCGG GAGTGATCCG CAAGGTGGGC AAACTGGTGG GCAAGATGAC CTACGGGGTC
AGCGCCGACA ACATGGAGAA GTACTTCCAG CGCAGCTTCC AGGCCCGCGA CGACCTGCCC
ATCGGCCATT ACGAGTACGC CAACGCCCTG ACCTACGTGT ACGGCGACGA TCAGGAGGAC
AAGGTGATCA CCCACCTTGA GCGCGCCGCG GCGATCAAGC CGATCAATGC CATGGAGGCC
CTGGAAGTGG CGCACGCCCA GAAGATGCTG GCGCAGTACC GGCAGAAGCT GGCGAAGAAC
TAG
 
Protein sequence
MRRLLIALLA TCSLSAAAAD NWKPFPLDQS AYDYSGDKLR QAWPQLTRGF GDYPFPDADW 
VVNMATRHPQ ALEKTVAAGT GFTGQPEEAE IYAQKLQDVW RLMFRGDFAQ AKEQGLALGV
GGQVPAMFAQ VIYAMFLVPD QAEKHRLLEE VIAYTDEAGE LVQADTVAQF GRVYAKARLG
EELSVPVVLK RGYTTQIPNE LKALLAKQPQ QPFALALYGG YEAGVIRKVG KLVGKMTYGV
SADNMEKYFQ RSFQARDDLP IGHYEYANAL TYVYGDDQED KVITHLERAA AIKPINAMEA
LEVAHAQKML AQYRQKLAKN