Gene Pmen_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0892 
Symbol 
ID5108750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1012360 
End bp1012791 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content65% 
IMG OID640502108 
Producthypothetical protein 
Protein accessionYP_001186392 
Protein GI146305927 
COG category[S] Function unknown 
COG ID[COG3105] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACAGA CACTTGCAGC CTGGTTGATA CCCGCCCTGA CCCTGGTGGT CGGCATCGCC 
GTGGGCTTTC TGCTCGCCCG CCTGGCCCCC AATGCCGCAC CGGGCCGTAC CCAGCGGCAG
ATGGATGAAA TGCAGGCTCG CTTCGAGGCC TACCAGAACG AAGTGGTGAC CCACTTCAAC
ACCACCGCCA GCCTGGTGAA GAAACTCACC CAGAGCTACC AGGACGTGCA GGAGCATCTG
TCCGACGGCG CCAACCGCCT GGCGCTGGAC GAGCTGACCC GTCAGCGCCT GCTGGCCACG
CTCAACAGCA CCGAAGCCGG CGAGAAGCGC GAGCGCCTGA CCCCGCCGAA GAACTACGAA
ATGCCCAAGG ACTATGCGCC CAAGAGCGAC GGCCCCGGCA TGCTGGACGA GAGCTACGGC
CTGAAGAAGT AA
 
Protein sequence
MEQTLAAWLI PALTLVVGIA VGFLLARLAP NAAPGRTQRQ MDEMQARFEA YQNEVVTHFN 
TTASLVKKLT QSYQDVQEHL SDGANRLALD ELTRQRLLAT LNSTEAGEKR ERLTPPKNYE
MPKDYAPKSD GPGMLDESYG LKK