| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0868 |
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| Symbol | |
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| ID | 5108962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 990214 |
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| End bp | 990678 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502084 |
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| Product | PTS IIA-like nitrogen-regulatory protein PtsN |
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| Protein accession | YP_001186368 |
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| Protein GI | 146305903 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
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| TIGRFAM ID | [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0716373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCCGAC TTGAAAACAT CCTGACCCCC GGCCGTTCCC TGGTGAACGT GCCGGGCGGC
AGCAAGAAAC GCGTGCTCGA ACAGATCGCC AACCTGGTGG CGCGCGACCT GCCCGACCTG
GACGCCCAGG ATATATTCGA AAGCCTTATC GCCCGCGAGA AGCTCGGTTC CACCGGCTTC
GGCAACGGCA TCGCCATTCC CCACTGCCGC CTGGCCGGCT GCAGTGCTCC GATCAGCGCC
GTGCTGCACC TGGAGACCGC CGTCGACTTC GACGCCATCG ACGGTGCGCC GGTGGATCTG
CTGTTCGTCC TGCTGGTACC GGAAGCGGCA ACCGATGCCC ATCTGGAGCT GCTGCGCCAG
ATCGCCAGCA TGCTCGACCG TCAGGATGTA CGTGAACGTC TGCGCCAGGC AGCGAGTGGC
GGAGATCTCT ACCAGGTGGT CGTGGACATT CAGAACGGTC TATAA
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| Protein sequence | MIRLENILTP GRSLVNVPGG SKKRVLEQIA NLVARDLPDL DAQDIFESLI AREKLGSTGF
GNGIAIPHCR LAGCSAPISA VLHLETAVDF DAIDGAPVDL LFVLLVPEAA TDAHLELLRQ
IASMLDRQDV RERLRQAASG GDLYQVVVDI QNGL
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