| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0804 |
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| Symbol | |
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| ID | 5108898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 914842 |
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| End bp | 916011 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640502020 |
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| Product | FMN-dependent alpha-hydroxy acid dehydrogenase |
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| Protein accession | YP_001186304 |
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| Protein GI | 146305839 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGGA TTGCATCCGG GCTACGAATC AACGATGACA ATGCGCCGAG AAACGCCATG
GCCTTGCCCA AACTGCAGCA GATTCCACCG ACCATCGCCG CCGTCGCCGA CTACGAACCC
TATGCCCGCG AGCGCATGAG CGAGCAGGCC TGGGCCTATC TGGCCGGCGG CGCCGCCGAC
GAGCTGAGCC TGGCCGACAA TCGCGCCGCG TTCGAGCGGC TGCGCCTGCG TGGCCGGGTG
CTGCAGGACC TGAGCGGCGG CAATACGCGC CTGCGGCTGT TCGGTCAGGA CTTCGCCCAT
CCGGTCTTTC TCGCGCCGGT GGCCTATCAG AAGCTGGCGC ATCCTGACGG GGAGCTGGCC
AGCGTGCTCG CGGCTTCTGC GCTGGGCGCC GGTATGGTGG TCAGCACCCA GGCCAGCGTC
GAGCTGGAGG CCATCGCGGC GCAGGCGCAG GCACCGCTGT GGTTCCAGCT GTATATCCAG
CCTGATCGCG AGTTCACCGC GGCCTTGATC CGCCGTGCAG AAAGCGCCGG CTACCAGGCG
CTGGTGCTGA CCGTGGACGC CCCGGTCAAT GGCGTGCGCA ATCGCGAGCA GCGCGCCGGC
TTCGCCCTGC CGGCAGGCGT CGAGGCGGTC AATCTGCGCG GAATGCGGCC ACTGCAGGCA
CAGGCCGAGC CGCACAACGG CAGTCTGCTG CTGGGTGGCC CGCTGCTGGC CGCGGCGCCG
ACCTGGGCCG ACCTCACCTG GCTGCGTGAG CAGACGCGTT TGCCAATCCT GCTCAAGGGC
ATCATGAGCG GCGCCGACGC CGAACAGGCG CTGACGGCGG GGATGGACGG GCTGATCGTC
TCCAACCATG GCGGACGCAC GCTCGATGGT CTGCCTGCGA CCATCGACGT GCTGCCCGAA
GTCGCCGCCG CTGTGCAGGG GCGCGTGCCG CTGCTGCTCG ATGGCGGTAT CCGGCGTGGC
AGCGACATCC TCAAGGCGCT GGCGCTGGGC GCGGACGCCG TGCTGGTGGG CAGGCCCTAC
GTCTTCGCTC TGGCGACCGC CGGGGCGATA GGCGTGGCGC ATGTGCTGCA ACTGCTGCGG
GCCGAGCTGG AAGTGGCCAT GGCCCTGACC GGCTGCGCCG ATCTGGCCAG TATCGGGCCG
CAGGTCATCT GGCGTTCGAC GCTACGCTAG
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| Protein sequence | MPRIASGLRI NDDNAPRNAM ALPKLQQIPP TIAAVADYEP YARERMSEQA WAYLAGGAAD
ELSLADNRAA FERLRLRGRV LQDLSGGNTR LRLFGQDFAH PVFLAPVAYQ KLAHPDGELA
SVLAASALGA GMVVSTQASV ELEAIAAQAQ APLWFQLYIQ PDREFTAALI RRAESAGYQA
LVLTVDAPVN GVRNREQRAG FALPAGVEAV NLRGMRPLQA QAEPHNGSLL LGGPLLAAAP
TWADLTWLRE QTRLPILLKG IMSGADAEQA LTAGMDGLIV SNHGGRTLDG LPATIDVLPE
VAAAVQGRVP LLLDGGIRRG SDILKALALG ADAVLVGRPY VFALATAGAI GVAHVLQLLR
AELEVAMALT GCADLASIGP QVIWRSTLR
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