Gene Pmen_0800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0800 
Symbol 
ID5108894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp909607 
End bp909885 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content62% 
IMG OID640502016 
Producthypothetical protein 
Protein accessionYP_001186300 
Protein GI146305835 
COG category[S] Function unknown 
COG ID[COG3553] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.662726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAACA GCCATAGCCG TTTTCCCAGT CGCCAGGCGC CGCGTCTGCT TAGCCGCCTG 
TGCAGGCACT TTTCGCACAA GATCGAGGCG AGCTGGAACG AGCGCGAAGG CCTGCTGCGT
TTTTCCATCG GCGAGTGCGC ACTGCAGGCC GATGACCAGG GGTTGCAACT GACCTGCACG
GCGCCGAGCG TAGCCGAACT GGACGAGTTG CAGGAGGTCA TCCGGCGCCA TCTGCAGGGC
TTCGTCCAGG TAGATGAACT GGTGCTGCAA TGGCACTGA
 
Protein sequence
MPNSHSRFPS RQAPRLLSRL CRHFSHKIEA SWNEREGLLR FSIGECALQA DDQGLQLTCT 
APSVAELDEL QEVIRRHLQG FVQVDELVLQ WH