Gene Pmen_0676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0676 
Symbol 
ID5109006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp750514 
End bp751887 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content66% 
IMG OID640501889 
ProductL-glutamine synthetase 
Protein accessionYP_001186176 
Protein GI146305711 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.291312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.545703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAAC CACGGGATGT AAAGACCCTG GGCGATGCCC GGCGCATCGT CGAGGAACGT 
GGCCTGAGCC ACGTGAAGGT CGGTCTGTTC GACAACGATG GGGTGATGCG CGGCAAGTAC
ATGAGCCGCA GCAAGTTCTT CTCCGCCCTG GAGCACGGCT TCGCCTTCTG CGACGTGGTG
CTCGGCTGGG ACGTCAAGGA CCAGCTCTAT GACAACGCCC AGTACACCGG CTGGCACAGC
GGCTACCCCG ATGCGCCGGT GCGCATCCTG CCGCACACCT GTCGCGAGAT TCCCTTCGAA
AACGGCATGC TGCTGTTTCT CGCCGAATTC GACCAGCAGG CCGAGGCGGT GTGCCCGCGC
GGCACCCTGC GCCGGGTGAT CGAGCGCTGC CAGGCCATGG GCTTCGAGCC TTATGCGGCG
CTGGAGTACG AGTTCTTCAT GTTCGACGAA ACGCCGGAGT CGGCGCGGGC CAAGGGCTTT
CGCGACCTCA AGCCGTTCAC CCCGGACTGG TTCGGCTACT CGATGATCCG CAACTCGGTG
CACGCCGAGC TCTATCACCA GATCCTCGAG ATGGGCGAGG CGATGGATTT TCCCATCGAG
GGCCTGCACA CCGAGACCGG CCCCGGTGTG CTGGAGGCGG CCATCGCCTA TGACCGCGCC
GAGGCGGCGG CGGACAAGGG CGCGCTGTTC AAGACCTTCA TGAAGGTGCT GGCCCAGCGC
AACGGCCTGA TGGCTACGTT CATGGCCAAG TGGTCGGGCA AGTACCCCGG GCAGAGCGGG
CATATCCACG TGTCGCTGCG TGACCGTGCG AGCGACAAGT CGGCCTTCTT TGATCCCGAT
CAGGCGCACA ACATGAGCAA GCTGCAGCGG CATTTCCTCG CCGGCCAGCA GCGCCTGATG
CCGGAATTCC TGTGCATGGT GGCGCCGACG CTGAACAGCT ATCGGCGCCT GATCCCCGGT
TTCTGGGCAC CCACCGACGC CACCTGGGGC GTGGAGAACC GCACCGCGGC GCTGCGGGTG
ATCCCCGGCA GCGACAAGTC GCAGCGCCAG GAGTACCGCC TCGGCGCCGC CGACGGCAAT
CCCTTCCTGG CCTTGTCGGT GGCCATCGGC TCGGGCCTTT ACGGAATCAT GCAGCAGTGG
GAGCCGACCG CGCCGGTCAG CGGCAACGCC TATGCGGTCA AGCACCCCGA GGAGCTGGCG
CTGCCGCGCA CGCTGTGGGA TGCGGCGCAG CGCCTGAAGG GCTCGCAGGC GGCGCGCGAG
CTGTTCGGCG ACGCCTTCGT CGAGCACTTC GCCGCCAGCC GAGAATGGGA AGAGCGCGAG
TACCGCCGCC ATGTCAGCGA CTGGGAGCTG GATCGCTATT TCGAAATCAT CTGA
 
Protein sequence
MFKPRDVKTL GDARRIVEER GLSHVKVGLF DNDGVMRGKY MSRSKFFSAL EHGFAFCDVV 
LGWDVKDQLY DNAQYTGWHS GYPDAPVRIL PHTCREIPFE NGMLLFLAEF DQQAEAVCPR
GTLRRVIERC QAMGFEPYAA LEYEFFMFDE TPESARAKGF RDLKPFTPDW FGYSMIRNSV
HAELYHQILE MGEAMDFPIE GLHTETGPGV LEAAIAYDRA EAAADKGALF KTFMKVLAQR
NGLMATFMAK WSGKYPGQSG HIHVSLRDRA SDKSAFFDPD QAHNMSKLQR HFLAGQQRLM
PEFLCMVAPT LNSYRRLIPG FWAPTDATWG VENRTAALRV IPGSDKSQRQ EYRLGAADGN
PFLALSVAIG SGLYGIMQQW EPTAPVSGNA YAVKHPEELA LPRTLWDAAQ RLKGSQAARE
LFGDAFVEHF AASREWEERE YRRHVSDWEL DRYFEII