| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0621 |
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| Symbol | psd |
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| ID | 5109583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 687091 |
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| End bp | 687951 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501832 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_001186121 |
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| Protein GI | 146305656 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAC GTCTGTTCAT TCTCAGCCAG TACCTGCTTC CCCATCACCT GCTGTCGCGC
CTGATCGGCT GCGTCGCCGA GTGCCGTATC GGCTGGCTGA AGAATCGTCT GATCGCCTGG
TTCGCCAAGC AGTATCGGGT CGACATGAGC GAAGCCCAGG TCGAGGACCT GAGCGCTTAC
GAGCATTTCA ACGCCTTCTT CACCCGCGCG CTGAAAGCGG GTGCCCGTCC TCTGGACGAG
ACCCCCGGCG CCATTCTCTG CCCGGCCGAC GGCGCGATCA GCCAACTCGG CGTCATCGAA
CACGGTCGCC TGTTCCAGGC CAAGGGCCAC AGCTTCAGCG CCACCGAGCT GCTCGGCGGC
GATGCCGAAC GCGCCGCGCC CTTCATGGGC GGCCAGTTCG CCACCGTGTA CCTGTCGCCC
AAGGACTATC ACCGCGTGCA CATGCCGCTG GCCGGCACGC TGAAGGAAAT GGTCTACGTG
CCGGGGCGCC TGTTCTCGGT CAACCAGACC ACGGCAGAGA ACGTACCGGA ACTGTTCGCC
CGCAACGAGC GGGTGGTCTG CCTGTTCGAC ACCGAACGCG GCCCGATGGC CGTGGTGCTG
GTCGGCGCGA TGATCGTCGC CAGCGTGGAG ACCGTGTGGG CCGGCCTGGT CACTCCGCCC
AAGCGCGAGC TGAAGAGCAC ACGCTATGAC GCCGAGTCGC GCGGACCTAT CGAGCTGGCC
AAGGGTGCCG AGCTCGGTCG TTTCAAACTG GGCTCTACCG CCATCGTGCT GTTCGGTCCG
CAGCAGGTGC AATGGGCCGA GGAACTGACC GCCGGCAGCA CGGTGCGCAT GGGCCAGCTG
CTGGGCAACG CGCAGCTCTG A
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| Protein sequence | MKQRLFILSQ YLLPHHLLSR LIGCVAECRI GWLKNRLIAW FAKQYRVDMS EAQVEDLSAY
EHFNAFFTRA LKAGARPLDE TPGAILCPAD GAISQLGVIE HGRLFQAKGH SFSATELLGG
DAERAAPFMG GQFATVYLSP KDYHRVHMPL AGTLKEMVYV PGRLFSVNQT TAENVPELFA
RNERVVCLFD TERGPMAVVL VGAMIVASVE TVWAGLVTPP KRELKSTRYD AESRGPIELA
KGAELGRFKL GSTAIVLFGP QQVQWAEELT AGSTVRMGQL LGNAQL
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