| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0595 |
|---|
| Symbol | |
|---|
| ID | 5109557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 654334 |
|---|
| End bp | 655230 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640501806 |
|---|
| Product | Mig-14 family protein |
|---|
| Protein accession | YP_001186095 |
|---|
| Protein GI | 146305630 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAGTC ACCTGCGATT CTGGCGCGAG CGCGGTTGGG CGCCGATCTC CGCCGCCGAC
TATGCCGATG CCTGGGCCAA CTTCGGCGGC AGCGTCGCCA CCCATCCCGA GGTGGTGGCG
CGCCTGGCCG ATCTGGCCGG GATTCCCGTG CGTTATCTGG GCTGGCTGGC CGACGGTCAG
CTGCAGGCGG CGATGCCCAC CTGGGGGCGG CATCTGGCGC TGTCCAAGGA CGTACTGAAG
CAGCAGGGCA GGCGCGGCCT GTTCGACCTG GGCAATGCCG AGGTGATTCT GCCCATAGCC
CAGAATGTGA AAGTGGCGGT GCAGCACCGC ATGCGTTACG TATCCGAGCT CAATGCGGCG
CAGATCAGCT CGCTGCGCGA ACAGCCGGAG GGTCTGGCGC TGGCTCGCGA GCCGGAGCAG
TACAGCAAGA AGTTCCGCTA CAACCAGCGC CGCGAGCAGC GTCTGCTGGA GGAGGCGGGC
GGGGTGATCC GGCCCATGCT GGAGCTGACG GCGCAGGAGC AGGCGCGCAT CTATGCCGAT
CTGTTCCAGC GCCGCTGGGG CTTCGAGGCC ACCGGCAAGG CTCACTTGGC TGAAGTGTTT
ACCCGGCTGC GCGACTTCAT GACCGGCTCG CTGATCTACC TGAACGACGA GCCGGTGGCG
ATCCAGGTGC TCTACCGGGT CGAGGCGCCG CGGTGGGTCA GCCTGGAGTA CATCAACGGC
GGGGTCGACC CGCAGCAGCG CGAGTTCAGC CCCGGCAGCG TGCTCAGCTT CGTCAACACG
CAGAGCGAGT GGGAGCAGGC GCGTGCGCTG GGCAAGCCTT TGCGCTATTC CTTCGGACGC
GCCGACCGCG AATACAAGGA TCGCTGGTGC CACCGGGTGC CGGTCTACCA GGTCTGA
|
|---|
| Protein sequence | MLSHLRFWRE RGWAPISAAD YADAWANFGG SVATHPEVVA RLADLAGIPV RYLGWLADGQ
LQAAMPTWGR HLALSKDVLK QQGRRGLFDL GNAEVILPIA QNVKVAVQHR MRYVSELNAA
QISSLREQPE GLALAREPEQ YSKKFRYNQR REQRLLEEAG GVIRPMLELT AQEQARIYAD
LFQRRWGFEA TGKAHLAEVF TRLRDFMTGS LIYLNDEPVA IQVLYRVEAP RWVSLEYING
GVDPQQREFS PGSVLSFVNT QSEWEQARAL GKPLRYSFGR ADREYKDRWC HRVPVYQV
|
|---|
| |