Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0589 |
Symbol | |
ID | 5109552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 647882 |
End bp | 649027 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640501802 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_001186091 |
Protein GI | 146305626 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCGTC GTATCAAGGT CTTGCAGTTG CATCCGGACT ACAACATCAA GGCGCACGAT TTCGCGGATC TCGGAGAGCA AATCTTTCAC GCCTTGCCTC CGGAGCGCTT CGAGACGGTT AATGCGTTTC TACGTGGACG GCCTGTCAGT GGTCAACCCG AGAGTAGGGC CGAGCGTTCG GTCTACTTTG AGTTTTCCGA CTCACAACTC AAAGGCATGC GCATTCGCGC CATGTGGCGG CTATTCCAGT ATTGCCGGAG TGAGCGCTTC GATGTGGTGA TCTGCAATCG CTTTAAGCCA GTGAACATGA TGCTGATGCT CAATCGTTGG CTAAAGGTTC CCCTGTGCAT CGGGATCGCG CATGGCTTTG GCGAATATGA CCGGGCGTAC CGCCGTCAGC AGACTGCTCG CCTGGTCAGC CCTGCGTGGC GTTTTGTCGG GGTTTCACCA GCGGTTCGGC AATATCTTCT CGATTGCCGG TGTGGTTTCA CCGAGCGCAA TACCGTCGCC ATAACCAATG CCATCGATAT CGTACAGGCT GAACGTCTGC AATTCTCGCG CGAGGACGCG CGGTCACGAC TGGGACTCGA GCCGAATGTA CGGTTCGTCG GCGCATTGGG ACGCCTGGTT CCGGTGAAAG GGCATATTCA TCTGGTGCGT GCTTTTGCAC AAAACGCTGG GCGACATCCG CATGCGCAAT TGGCGATCAT TGGCGCGGGA CGCGAGCATG ATCGCTTGCA GCAGGAATTG GAGCTTCTCG GATTGCAAGG GCGTGTTCAT CTGCTTGGTT TCCGCGAAAA TGCCCTGCGC TATGTGCGAG CCTTCGATAT ATGGGCCATG CCCTCTTTGG CAGAGGGGCT GGGGTTAGCG TTGCTTGAAG GAATGAGTGG GCACCTCCCG GTGATCGCAA GCGACGTTCC AGCTATGCTC CCGTTGATTG AGGGGGCAGG TGGTATCGCC GTAGCGCCGG CAGATGTTGA GGGGTTGAGC AGGGCCTTGG ATGAATATCT CTCATTGAGC GATGAGGAAC TCCGGTTAAA AGGCGAGCGA TCCTACAACT ATTTGAAAGA ACAGCACGAT ATTGAGGTTT TCCGCCAGCA ATACCTGAAG TTGATCGACT CTGCGTTGGC CGAGGTGCAG AAATGA
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Protein sequence | MVRRIKVLQL HPDYNIKAHD FADLGEQIFH ALPPERFETV NAFLRGRPVS GQPESRAERS VYFEFSDSQL KGMRIRAMWR LFQYCRSERF DVVICNRFKP VNMMLMLNRW LKVPLCIGIA HGFGEYDRAY RRQQTARLVS PAWRFVGVSP AVRQYLLDCR CGFTERNTVA ITNAIDIVQA ERLQFSREDA RSRLGLEPNV RFVGALGRLV PVKGHIHLVR AFAQNAGRHP HAQLAIIGAG REHDRLQQEL ELLGLQGRVH LLGFRENALR YVRAFDIWAM PSLAEGLGLA LLEGMSGHLP VIASDVPAML PLIEGAGGIA VAPADVEGLS RALDEYLSLS DEELRLKGER SYNYLKEQHD IEVFRQQYLK LIDSALAEVQ K
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