Gene Pmen_0589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0589 
Symbol 
ID5109552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp647882 
End bp649027 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content56% 
IMG OID640501802 
Productglycosyl transferase, group 1 
Protein accessionYP_001186091 
Protein GI146305626 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGTC GTATCAAGGT CTTGCAGTTG CATCCGGACT ACAACATCAA GGCGCACGAT 
TTCGCGGATC TCGGAGAGCA AATCTTTCAC GCCTTGCCTC CGGAGCGCTT CGAGACGGTT
AATGCGTTTC TACGTGGACG GCCTGTCAGT GGTCAACCCG AGAGTAGGGC CGAGCGTTCG
GTCTACTTTG AGTTTTCCGA CTCACAACTC AAAGGCATGC GCATTCGCGC CATGTGGCGG
CTATTCCAGT ATTGCCGGAG TGAGCGCTTC GATGTGGTGA TCTGCAATCG CTTTAAGCCA
GTGAACATGA TGCTGATGCT CAATCGTTGG CTAAAGGTTC CCCTGTGCAT CGGGATCGCG
CATGGCTTTG GCGAATATGA CCGGGCGTAC CGCCGTCAGC AGACTGCTCG CCTGGTCAGC
CCTGCGTGGC GTTTTGTCGG GGTTTCACCA GCGGTTCGGC AATATCTTCT CGATTGCCGG
TGTGGTTTCA CCGAGCGCAA TACCGTCGCC ATAACCAATG CCATCGATAT CGTACAGGCT
GAACGTCTGC AATTCTCGCG CGAGGACGCG CGGTCACGAC TGGGACTCGA GCCGAATGTA
CGGTTCGTCG GCGCATTGGG ACGCCTGGTT CCGGTGAAAG GGCATATTCA TCTGGTGCGT
GCTTTTGCAC AAAACGCTGG GCGACATCCG CATGCGCAAT TGGCGATCAT TGGCGCGGGA
CGCGAGCATG ATCGCTTGCA GCAGGAATTG GAGCTTCTCG GATTGCAAGG GCGTGTTCAT
CTGCTTGGTT TCCGCGAAAA TGCCCTGCGC TATGTGCGAG CCTTCGATAT ATGGGCCATG
CCCTCTTTGG CAGAGGGGCT GGGGTTAGCG TTGCTTGAAG GAATGAGTGG GCACCTCCCG
GTGATCGCAA GCGACGTTCC AGCTATGCTC CCGTTGATTG AGGGGGCAGG TGGTATCGCC
GTAGCGCCGG CAGATGTTGA GGGGTTGAGC AGGGCCTTGG ATGAATATCT CTCATTGAGC
GATGAGGAAC TCCGGTTAAA AGGCGAGCGA TCCTACAACT ATTTGAAAGA ACAGCACGAT
ATTGAGGTTT TCCGCCAGCA ATACCTGAAG TTGATCGACT CTGCGTTGGC CGAGGTGCAG
AAATGA
 
Protein sequence
MVRRIKVLQL HPDYNIKAHD FADLGEQIFH ALPPERFETV NAFLRGRPVS GQPESRAERS 
VYFEFSDSQL KGMRIRAMWR LFQYCRSERF DVVICNRFKP VNMMLMLNRW LKVPLCIGIA
HGFGEYDRAY RRQQTARLVS PAWRFVGVSP AVRQYLLDCR CGFTERNTVA ITNAIDIVQA
ERLQFSREDA RSRLGLEPNV RFVGALGRLV PVKGHIHLVR AFAQNAGRHP HAQLAIIGAG
REHDRLQQEL ELLGLQGRVH LLGFRENALR YVRAFDIWAM PSLAEGLGLA LLEGMSGHLP
VIASDVPAML PLIEGAGGIA VAPADVEGLS RALDEYLSLS DEELRLKGER SYNYLKEQHD
IEVFRQQYLK LIDSALAEVQ K