Gene Pmen_0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0520 
SymbolhisI 
ID5108144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp555935 
End bp556333 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content63% 
IMG OID640501733 
Productphosphoribosyl-AMP cyclohydrolase 
Protein accessionYP_001186022 
Protein GI146305557 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0145439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATT GGCTCGACGA AATCCACTGG AACGAAGACG GCCTGGTGCC GGCCATCGCC 
CAGGATCACC AGACCGGCCG CATCCTGATG ATGGCCTGGA TGAACCGTGA ATCCCTCGCC
CTCACCGTCA GCGAACAGCG CGCCATCTAC TGGTCACGCT CGCGTGGCAA GCTGTGGCGC
AAGGGCGAGG AGTCCGGCCA TGTGCAGAAG CTGCACGAGC TGCGTCTGGA CTGCGATGCC
GACGTGATCG TGCTGATGGT CGAGCAGCTC GGCGGCATCG CCTGCCACAC CGGGCGCGAG
AGCTGCTTCT ATCGCGTGTA CGAGAATGGC GGCTGGAAAA CCGTCGACGC CGTGCTGAAA
GATCCGCACG CCATCTATGC AGGACACAGC CATGAGTGA
 
Protein sequence
MNDWLDEIHW NEDGLVPAIA QDHQTGRILM MAWMNRESLA LTVSEQRAIY WSRSRGKLWR 
KGEESGHVQK LHELRLDCDA DVIVLMVEQL GGIACHTGRE SCFYRVYENG GWKTVDAVLK
DPHAIYAGHS HE