Gene Pmen_0508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0508 
Symbol 
ID5108427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp548890 
End bp549897 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content64% 
IMG OID640501721 
Productfructose-1,6-bisphosphatase 
Protein accessionYP_001186010 
Protein GI146305545 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0158] Fructose-1,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCG TCACCCTGAG CCGCTACCTG ATCGAGCAGA CTCGCAGCCA TAACACCCCG 
GCCGATCTGC GTTTCCTTAT CGAAGTCGTG GCACGGGCCT GCAAGGCGAT CAGCCACCAG
GTTTCCAAGG GCGCCCTCGG TGGCGTACTG GGCAGCCTGG ACAGCGAGAA CGTGCAGGGC
GAAGTGCAGA AGAAGCTCGA CGTCATCTCC AACGAGATCC TCCTCGAAGC CAACGAATGG
GGCGGTCACC TGGCCGGCAT GGCGTCCGAG GAAATGGACA ACGCCTACCA GATCCCCGGC
AAGTACCCCA AGGGTGCTTA TCTGCTGGTC TTCGACCCGC TGGATGGCTC CAGCAACATC
GACGTCAACG TCTCGGTCGG TACCATCTTC TCCGTGCTGC GCTGCCCGGA CCGCAACGGT
GACACCGGCG ACCTGGGCGA GGACGCCTTC CTCCAGCCGG GCACCCAGCA GGTTGCGGCC
GGCTACGCCA TCTACGGCCC GCAGACCATG CTGATGCTGA CCCTTGGCGA CGGCGTCAAG
GGCTTCACCC TGGATCGTGA ACTGGGCAGC TTCGTGCTCA CCCACGACAA CATCAAGGTG
CCGGAGTCGA CCAAGGAATT CGCCATCAAC ATGTCCAACC AGCGCCACTG GGAAGCCCCG
GTACAGCGCT ACGTCTCCGA GCTGCTGGCC GGCGAGACCG GGCCGCTGGG ACGTAACTAC
AACATGCGCT GGATCGCCTC GATGGTGGCC GACGTGCATC GCATTCTCAC CCGTGGCGGT
GTGTTCATGT ACCCGCGCGA CGCCCGCGAG CCGGACAAGC CGGGCAAGCT GCGTCTGATG
TACGAGGCCA ACCCGATGTC GATGATCATC GAGCAGGCCG GCGGCGCCGC CACCGACGGC
AGCCAGCGCA TCCTCGATAT CCAGCCCACT TCCCTGCACC AGCGTGTGCC GGTGTTCCTC
GGCTCCAAGG AGGAAGTGCT GCGCGTCACC GCCTATCACC GGGGCTGA
 
Protein sequence
MSRVTLSRYL IEQTRSHNTP ADLRFLIEVV ARACKAISHQ VSKGALGGVL GSLDSENVQG 
EVQKKLDVIS NEILLEANEW GGHLAGMASE EMDNAYQIPG KYPKGAYLLV FDPLDGSSNI
DVNVSVGTIF SVLRCPDRNG DTGDLGEDAF LQPGTQQVAA GYAIYGPQTM LMLTLGDGVK
GFTLDRELGS FVLTHDNIKV PESTKEFAIN MSNQRHWEAP VQRYVSELLA GETGPLGRNY
NMRWIASMVA DVHRILTRGG VFMYPRDARE PDKPGKLRLM YEANPMSMII EQAGGAATDG
SQRILDIQPT SLHQRVPVFL GSKEEVLRVT AYHRG