Gene Pmen_0450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0450 
Symbol 
ID5108369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp479186 
End bp479572 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content67% 
IMG OID640501663 
Productmembrane protein-like protein 
Protein accessionYP_001185952 
Protein GI146305487 
COG category[S] Function unknown 
COG ID[COG3686] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTTG CCTACTGGTG CGTGCTGATC GCCATCCTCC TGCCCTATCT GGCCACCACA 
ACCGCCAAGT TCTTCGGGCC CGGTTACGGG CCGCGGGCCA ACAGCGACCC GCGCGCCTTC
CTCGCTGGCC TCGAGGGCTG GCGCAAGCGC GCCAACAATG CCCAGCTCAA TGGCTTCGAG
GTGACTCCGG CCTTCGCCGC GGCAGTGATC ATCGCCCATC AGGCGGGTGG CGCCGAGCAG
GGGCTGCTCG ATCAGCTGGC CATGGCGTTC ATCGTCAGCC GCGTGCTGTA TCTCATCTGC
TACCTGGCCG ACTGGGGGCC GGTGCGCTCG CTGGTATGGT TCGCCGGCAT GGGGCTGATT
GTCGCGCTGT TCGTGGTCTC TGCCTGA
 
Protein sequence
MTLAYWCVLI AILLPYLATT TAKFFGPGYG PRANSDPRAF LAGLEGWRKR ANNAQLNGFE 
VTPAFAAAVI IAHQAGGAEQ GLLDQLAMAF IVSRVLYLIC YLADWGPVRS LVWFAGMGLI
VALFVVSA