| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0396 |
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| Symbol | pyrC |
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| ID | 5108318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 412740 |
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| End bp | 414011 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640501612 |
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| Product | dihydroorotase |
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| Protein accession | YP_001185901 |
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| Protein GI | 146305436 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
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| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTACCG CAATCCTCGG CGCCCGCGTG ATCGACCCGG CCAGCGGCCT GGATCAGGTC
ACTGACCTCT ATATCGACGG CACCAAGCTG GTCGCCTTCG GCCAGGCGCC GGCCGGTTTC
ACTGCTGACA AGACGCTCAA CGCCCAAGGA CTGATCGCTG CCCCCGGCCT GGTCGACCTG
TCCGTGGCCC TGCGTGAACC GGGTTACAGC CGCAAGGGCA GCATCGCCAC GGAAACCCTG
GCTGCAGCCG CAGGCGGCGT CACCAGCCTG TGCTGCCCGC CGCTGACCAA GCCGGTGCTG
GACACTCCGG CGGTGGCCGA GCTGATCCTT GATCGCGCCC GCGAAGCCGG ACACACCAAG
GTCTTCCCCA TCGGCGCACT GAGCAAGGGC CTGGCCGGCG AGCAGCTGGC CGAGCTGGTC
GCCCTGCGCG ATGCCGGCTG CGTGGCTTTC GGCAACGGCC TGGACAATTT CCGCAGCGCC
CGCACCCTGC GTCGCGCGCT GGAATATGCG GCCACCTTCG ACCTGCAGGT GATCTTCCAT
TCGCAGGACT TTGATCTGGC CGAAGGCGGC CTGGCCCACG AAGGCCCGAC CGCCAGCTTC
CTCGGCCTGG CCGGCATTCC GGAAACCGCC GAGACTGTTG CCCTGGCCCG CGACCTGCTG
CTGGTGGAGC AGAGCGGCGT ACGTGCGCAC TTCAGCCAGA TCACCAGCGC CCGTGGCGCC
GAGCTGATCG CCAATGCTCA AGCGCGCGGC CTGCCAGTAA CCGCTGATGT GGCTCTGTAC
CAACTGATCC TCACCGACGA GGCGCTGATC GACTTCTCCA GCCTCTACCA TGTGCAGCCG
CCGCTGCGCT CGCGGGCCGA CCGCGATGGT CTGCGCGAAG CGGTAAAGGC CGGAGTGATC
TCGGCCATCG CCAGCCACCA CCAACCGCAC GAACGCGACG CCAAGCTGGC GCCCTTCGCC
GCCACCGAGC CGGGCATCAG CAGCGTGCAA CTGCAGCTGC CGCTGGCCAT GAGCCTGGTG
CAGGACGGCC TGCTGGATCT GCCGACGCTG CTGGCGCGTC TGTCCAGCGG CCCGGCTGCC
GCCTTGCGCC TGCCGGCCGG CACGCTGAGC GTCGGCGGCG CCGCCGATAT CGTGCTGTTC
GATGCGCAGG CCTCCACCGT CGCTGGTGAA CAGTGGTACT CCAAGGGCAG CAACTGCCCG
TTCATCGGCC ATTGCCTGCC CGGCGCGGTG CGCTACACGC TGGTGGATGG ACATATCAGC
TACCAGAGCT GA
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| Protein sequence | MRTAILGARV IDPASGLDQV TDLYIDGTKL VAFGQAPAGF TADKTLNAQG LIAAPGLVDL
SVALREPGYS RKGSIATETL AAAAGGVTSL CCPPLTKPVL DTPAVAELIL DRAREAGHTK
VFPIGALSKG LAGEQLAELV ALRDAGCVAF GNGLDNFRSA RTLRRALEYA ATFDLQVIFH
SQDFDLAEGG LAHEGPTASF LGLAGIPETA ETVALARDLL LVEQSGVRAH FSQITSARGA
ELIANAQARG LPVTADVALY QLILTDEALI DFSSLYHVQP PLRSRADRDG LREAVKAGVI
SAIASHHQPH ERDAKLAPFA ATEPGISSVQ LQLPLAMSLV QDGLLDLPTL LARLSSGPAA
ALRLPAGTLS VGGAADIVLF DAQASTVAGE QWYSKGSNCP FIGHCLPGAV RYTLVDGHIS
YQS
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