Gene Pmen_0341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0341 
Symbol 
ID5110310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp347083 
End bp348462 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content63% 
IMG OID640501557 
ProductL-glutamine synthetase 
Protein accessionYP_001185846 
Protein GI146305381 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0727612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGTAC CCCCGCGTGC CGTTCAGCTT AACGAAGCGA ACGCGTTCCT TAAGGAACAT 
CCTGAGGTCC AGTTCGTCGA CCTTCTTATT GCAGATATGA ATGGTGTGGT GCGCGGCAAG
CGCATCGATC GAAACGCCCT TCACAAGGTG TACGAAAAAG GCATCAACCT GCCGGCTTCG
CTCTTCGCCC TCGACATCAA CGGCTCCACC GTCGAAAGCA CCGGCCTCGG CCTGGACATC
GGCGACGCCG ACCGTATCTG CTTCCCCATC CCCAATACCC TGTGCAACGA ACCCTGGCAG
AAGCGCCCGA CCGCGCAGCT GCTGATGACC ATGCACGAGC TGGACGGCAC GCCCTTCTTC
GCCGACCCGC GCGAGGTATT GCGCCAGGTG GTGCAGAAGT TCGACGAACT GGGCCTGCGT
ATCTGCGCAG CCTTCGAGTT GGAGTTCTAC CTGATCGACC AGGAGAACGT GAACGGTCGG
CCGCAGCCGC CACGCTCGCC GATTTCCGGC AAGCGTCCGC ACTCCACCCA GGTCTACCTG
ATCGACGACC TCGACGAGTA CGTCGACTGC CTGCAGGACA TGCTCGAAGC CGCCAAGGAG
CAGGACATCC CGGCCGATGC CATCGTCAAG GAAAGCGCCC CGGCGCAGTT CGAGGTCAAC
CTGCATCACG TCGAGGACGC CATCAAGGCC TGCGACTACG CGCTGCTGCT CAAGCGCCTG
ATCAAGAACA TCGCCTACGA CCACGAGATG GACTCCACCT TCATGGCCAA ACCCTATCCG
GGTCAGGCCG GCAACGGGTT GCACGTGCAC ATCTCGCTGC TCGACAAGAA GACCGGCAAG
AACATCTTCG CCGCCGACAA CCCGCTGGAG AACACCTCGC TGCGCCATGC CGTGGGCGGC
ATTCTCGATA CCATGGCCGC GTCGATGGCC TTCCTCTGCC CCAACGTCAA CTCCTACCGC
CGCTTCGGTG CGCAGTTCTA CGTGCCCAAC GCGCCGAGCT GGGCGCTGGA CAACCGCACC
GTGGCCGTGC GCGTGCCGAC CGGCAGCCCG GATGCCGTGC GCATCGAACA CCGGGTGGCC
GGCGCCGATG CCAACCCCTA CCTGATGCTG GCGTCGATCC TTGCCGGTAT CCACCACGGC
CTGACCAACC AGATCGAACC GGGCGAGCCG ATCGAAGGCA ACGCCTACGA GCAGCTCGAG
CCCAGCCTGC CGAACAACCT GCGCGATGCC CTGCGCGAGC TGGACGACAG CGAAGTGCTG
AACAAGTACA TCGATCCCAA GTACATCGAC ATCTTCGTCG CCTGCAAGGA AGCCGAGCTG
CAGGAGTTCG AGACCACCAT TTCCGACCTC GAGTACAACT GGTACCTGCA TACCGTGTGA
 
Protein sequence
MSVPPRAVQL NEANAFLKEH PEVQFVDLLI ADMNGVVRGK RIDRNALHKV YEKGINLPAS 
LFALDINGST VESTGLGLDI GDADRICFPI PNTLCNEPWQ KRPTAQLLMT MHELDGTPFF
ADPREVLRQV VQKFDELGLR ICAAFELEFY LIDQENVNGR PQPPRSPISG KRPHSTQVYL
IDDLDEYVDC LQDMLEAAKE QDIPADAIVK ESAPAQFEVN LHHVEDAIKA CDYALLLKRL
IKNIAYDHEM DSTFMAKPYP GQAGNGLHVH ISLLDKKTGK NIFAADNPLE NTSLRHAVGG
ILDTMAASMA FLCPNVNSYR RFGAQFYVPN APSWALDNRT VAVRVPTGSP DAVRIEHRVA
GADANPYLML ASILAGIHHG LTNQIEPGEP IEGNAYEQLE PSLPNNLRDA LRELDDSEVL
NKYIDPKYID IFVACKEAEL QEFETTISDL EYNWYLHTV