| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0309 |
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| Symbol | rho |
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| ID | 5110279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 316206 |
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| End bp | 317465 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640501526 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001185815 |
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| Protein GI | 146305350 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.89155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGA CCGAACTCAA GCAAAAGCCG ATTGCCGAAC TGCTGGACAT GGCCGAACAG
ATGGGCCTGG AAAACATGGC TCGTTCGCGC AAGCAGGACA TCATCTTCGC CCTGCTGAAA
AAGCATGCCA AAAGCGGCGA GGAAATTTCC GGCGACGGCG TGCTGGAGAT TCTCCAGGAC
GGTTTCGGCT TCCTGCGCAG CGCCGACTCC TCCTACCTGG CCGGCCCGGA CGACATTTAC
GTATCGCCCA GCCAGATCCG CCGTTTCAAC CTGCGTACCG GTGACACCAT CGTCGGCAAG
ATCCGTCCGC CGAAGGAAGG CGAGCGTTAC TTCGCCCTGC TCAAGGTCGA CAGCATCAAC
TTCGACCGCC CGGAAAACGC CAAGAACAAG ATCCTGTTCG AGAACCTGAC GCCGCTGTTC
CCCAACAAGC GCCTGACCAT GGAAGCCGGC AACGGCTCCA CCGAGGACAT CACCGGCCGC
GTGATCGACC TCTGCGCGCC GATCGGCAAG GGCCAGCGTG GCCTGATCGT CGCCCCGCCG
AAAGCGGGCA AGACCATCAT GCTGCAGAAC ATCGCCTCGA ACATCACGCG TAACAACCCG
GAAGTGCACC TGATCGTTCT GCTGATCGAC GAGCGCCCGG AAGAAGTGAC CGAGATGCAG
CGCACCGTGC GCGGCGAAGT GGTCGCCTCC ACCTTCGACG AGCCGCCGAC CCGCCACGTG
CAGGTCGCCG AGATGGTGAT CGAGAAGGCC AAGCGCCTGG TCGAGCACAA GAAGGACGTG
GTCATCCTGC TCGACTCCAT CACCCGTCTG GCGCGTGCCT ACAACACCGT GATCCCCAGC
TCCGGCAAGG TCCTCACCGG TGGTGTCGAC GCCCACGCCC TGGAGAAGCC CAAGCGCTTC
TTCGGCGCCG CGCGCAACAT CGAGGAAGGC GGCAGCCTGA CCATTCTCGC CACCGCGCTG
ATCGAAACCG GCTCGAAGAT GGACGAGGTG ATTTACGAGG AATTCAAGGG CACCGGCAAC
ATGGAGCTGA TCCTGGATCG CCGCGTGGCC GAGAAGCGTA CCTTCCCGGC GATCAACATC
AACAAGTCCG GCACCCGTCG CGAAGAGCTG CTGACCGGCG AGGAAGAGCT GTCGCGCATG
TGGATTCTGC GCAAGCTGCT GCACCCGATG GACGAGATCG CTGCCATCGA GTTCCTGATC
GACAAGCTGA AAGCGACCAA GACCAACGAT GAGTTCTTCC TGTCGATGAA GCGCAAGTAA
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| Protein sequence | MNLTELKQKP IAELLDMAEQ MGLENMARSR KQDIIFALLK KHAKSGEEIS GDGVLEILQD
GFGFLRSADS SYLAGPDDIY VSPSQIRRFN LRTGDTIVGK IRPPKEGERY FALLKVDSIN
FDRPENAKNK ILFENLTPLF PNKRLTMEAG NGSTEDITGR VIDLCAPIGK GQRGLIVAPP
KAGKTIMLQN IASNITRNNP EVHLIVLLID ERPEEVTEMQ RTVRGEVVAS TFDEPPTRHV
QVAEMVIEKA KRLVEHKKDV VILLDSITRL ARAYNTVIPS SGKVLTGGVD AHALEKPKRF
FGAARNIEEG GSLTILATAL IETGSKMDEV IYEEFKGTGN MELILDRRVA EKRTFPAINI
NKSGTRREEL LTGEEELSRM WILRKLLHPM DEIAAIEFLI DKLKATKTND EFFLSMKRK
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