| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0229 |
|---|
| Symbol | |
|---|
| ID | 5106196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 234834 |
|---|
| End bp | 236258 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640501445 |
|---|
| Product | putative metal dependent phosphohydrolase |
|---|
| Protein accession | YP_001185735 |
|---|
| Protein GI | 146305270 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATGACG CCGTCGCGCT GGAAGACGTC ATGCTGGCAC TGGCCATGGT CGGCGATCTG
AGCATGGGCC AGCCCATCGA TCAGTCGCGG CGTACCGCGC GCCTGGCGCA ATGGCTGGCG
CAGGCCTGTG GCGGTGATCG GGCGCAAATC GATGCGGCCC GGCAGGTGGC GCTGCTGCGC
TGGTCCGGCT GTACCGCCAA CGCCGATGGC TTCATGCGTC TGCTCGGCGA CGACGTCGGC
GGCCGCCGCG CCATGCTGGC GCAAACCCTC GATGCCGCAG GCCAGCGCGC CATGCTGCGC
ACCACGCCGC TGGCCCAGGT GCATTGCGAG GTCGCCGGCG ATATCGCCCG CACCCTGGCG
CTGGGGACGG AAGTCGAGCG TGGTCTGCGC CATATCTTCG AGTGCTTCGA CGGCAGCGGT
CGCCCGCTAG GCCTGCGTCA CCCCGATGTC CCGCCGGTGG TGTATCAGGT CGTGTTGGCC
GGCGATCTGG AAATCCTCTC ACGGGCCCAC GGCCTGGACG TGGCGCTGGA GTGGATCGGC
GCGCAGGGTG ATCGCCGTTA TCCCGCTGTT CTTGCCGACC TGCTCGCCCG CCATGCCGCG
GATTGGCTGC AAGCGCTGCG CACCCCCGAG GGCGTGCAGG CTGCCAGCGG GGCGGAGGTT
CCACTGACCC TGGTGGGCGA TGTGATCGAC CTCAAACTGC CCTGGCTGGC CGGCTATTCA
CGCCAGGCCG CGAGCCTGGT GCGCGACGCT GCTCGGCTCT GGGGCTTGCC CGAAGCGCGC
ATCGAACTGC TGGCCAAGGC GGCGCTGATC CATGGCGTGG GCCGGGCGGC CGTGCCCAAT
CGAATCTGGA GCACGCCCGG ACCGCTGCTC GACGGTGATC TCGAAGCGGT GCGCCTGGTG
CCCTACTGGA CGCACCGCGC CTGCAGCCAG ATCGGCGGCC TGAACGAAGC CGGACAACTG
GCTGCGCATG CCTACGAACG CCTGGATGGC AGCGGCTATT TCCGCTCGTT GAGTGGCGAC
GCCCTGCAGG TCGAACACCG TCTGCTGAGC GCCGCGCTGG CCTGGCTGGC GCTGCGTGGC
GAACGCCCCT GGCGCGCTGC CTTCAGCGAT GAGCAGGCCG CCCGCGTATT GCTGGATGAA
GCCGAGCAGG GCCGCTTCGA CCCACGCGCC TGCCAGGCGG TGATCAGCGC CGCGCATGGC
GAGCAGGCAC CGCTGGCCGG CAAGCCCGGC AACGGCCTGC TCAGCGAGCG CGAGACGCAG
ATTCTGCAGC GCATCAGCAG CGGGGCGAGC AACAAGGAAG TGGCGCGCGA CCTGGGCATC
AGCCCGAGCA CGGTGCGCAC CCATGTCGAG AGCGTATTCC GCAAGCTGCA GTGTTCGACG
CGCGCGGCGG CGACCTTGAA GGCGCTGACG CTGGGCGTGA TCTAA
|
|---|
| Protein sequence | MNDAVALEDV MLALAMVGDL SMGQPIDQSR RTARLAQWLA QACGGDRAQI DAARQVALLR
WSGCTANADG FMRLLGDDVG GRRAMLAQTL DAAGQRAMLR TTPLAQVHCE VAGDIARTLA
LGTEVERGLR HIFECFDGSG RPLGLRHPDV PPVVYQVVLA GDLEILSRAH GLDVALEWIG
AQGDRRYPAV LADLLARHAA DWLQALRTPE GVQAASGAEV PLTLVGDVID LKLPWLAGYS
RQAASLVRDA ARLWGLPEAR IELLAKAALI HGVGRAAVPN RIWSTPGPLL DGDLEAVRLV
PYWTHRACSQ IGGLNEAGQL AAHAYERLDG SGYFRSLSGD ALQVEHRLLS AALAWLALRG
ERPWRAAFSD EQAARVLLDE AEQGRFDPRA CQAVISAAHG EQAPLAGKPG NGLLSERETQ
ILQRISSGAS NKEVARDLGI SPSTVRTHVE SVFRKLQCST RAAATLKALT LGVI
|
|---|
| |