| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0117 |
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| Symbol | |
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| ID | 5106302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 116883 |
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| End bp | 117647 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501333 |
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| Product | amino acid ABC transporter periplasmic protein |
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| Protein accession | YP_001185623 |
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| Protein GI | 146305158 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCC TGCTTGCCCT CCTGCCCATG CTCGTTGCCC TGACCTGCGT CGGGGCGCAG
GAGGTTCTGC GGGTCGACTT CCGCGAACGC CCACCGGAAA TGCGCGCGGT CGACGGTATC
CCCAGCGGCC CGCTGATCAG CGTGCTGGAA ACCGCCGCGC AGCGCATCGG CGTGCGCCTG
CACTGGCGCC AGGCGCCTTT CCTGCGCAGC CTCGACGACC TGCGCTCGGG CCGCGTCGAT
CTGGTACCGC GCGTGCTGCT CACCGAGCAG CGTCGCGAGT ACATCCACTT CCTGCCGAGC
ATCGGCAACC AGCAGCTGAA CATCCGCTTC GTCGTCCATC CGGGGCGCGA AGCCGGGCTG
AAACGCTATG AGGATCTGCA CCGTCTCTCG GTAGGGGTCA AACGCGGCAC GGTCTATTTC
GAACCTTTCG ACAGCGACGA GCGCCTGGCA CGGGTCTATG CCAGCGACGA TGCACAGCTG
GCCGCGATGT TTCGCGCCGG ACGCCTCGAC ACCATTGCCG TGCTGGACAT GATGCCGATG
GAGGCGCAGT TCACCGCACT GGGCTTTGAG GACTTCAGCT ATGCCCATTA CGCGCACCGC
CAGGTGCTCG GCAATCACTT CGGCGCCTCG CTCAAGCGCT ACCGCAGCGA CCGCCGGGAA
CTCTACAACC GTCTGGCCGG CGAGCTCGAG CGCATGCGCG ACGAGGGAGA AGTCGCCCTG
ATCTACCGGC GCTATGGCGT GCTGCCACCG GATGAGGCGA ACTGA
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| Protein sequence | MKRLLALLPM LVALTCVGAQ EVLRVDFRER PPEMRAVDGI PSGPLISVLE TAAQRIGVRL
HWRQAPFLRS LDDLRSGRVD LVPRVLLTEQ RREYIHFLPS IGNQQLNIRF VVHPGREAGL
KRYEDLHRLS VGVKRGTVYF EPFDSDERLA RVYASDDAQL AAMFRAGRLD TIAVLDMMPM
EAQFTALGFE DFSYAHYAHR QVLGNHFGAS LKRYRSDRRE LYNRLAGELE RMRDEGEVAL
IYRRYGVLPP DEAN
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