| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0115 |
|---|
| Symbol | |
|---|
| ID | 5106300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 115947 |
|---|
| End bp | 116483 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640501331 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001185621 |
|---|
| Protein GI | 146305156 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3495] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCACC TGCTTCTCGC CCTGCTGCTG TGCACCGGCC TGGCCCACGC CGAACTGCCG
GAAACCGACT GGCTCGACCT GATGCCGCCC GAGGACCGCA AGGCCCTCGA GGAGATGCCC
GAAATCAGCC ACGACAGCCC GGAGGGTGAC AGCACCTTCT ACAGCGAAGG CGGCCTGCGC
CAGCAGGACC AGGACCTGCC GGCCGTGATG TACTCCACCA AGACCGTGAC CGAACTCGAC
GGCAAGGACA TTCGCCTGGG TGGCTATCCC GTGCCGCTGG AAAGCGACGA GAAAGGCAAC
AGCACCCTGT TCTTCCTGGT GCCCTATCCG GGCGCCTGCA TCCACGTGCC CCCACCGCCG
CCCAACCAGC TGGTGCTGGT GCGCTACCCC AGGGGCATTG CGCTCGAAGA CATCTACGCC
CCGCTGTGGG TCAGCGGCAC GCTGAAGGTG GAAAAGATCA GCAACGACCT GGCCGACGCC
GCCTACGCCA TGGACGCTGG CGAAGTGCGT CTGGTGACCG ACGAAGACCT CTACTGA
|
|---|
| Protein sequence | MRHLLLALLL CTGLAHAELP ETDWLDLMPP EDRKALEEMP EISHDSPEGD STFYSEGGLR
QQDQDLPAVM YSTKTVTELD GKDIRLGGYP VPLESDEKGN STLFFLVPYP GACIHVPPPP
PNQLVLVRYP RGIALEDIYA PLWVSGTLKV EKISNDLADA AYAMDAGEVR LVTDEDLY
|
|---|
| |