Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0093 |
Symbol | |
ID | 5106278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 88331 |
End bp | 89776 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640501309 |
Product | hypothetical protein |
Protein accession | YP_001185599 |
Protein GI | 146305134 |
COG category | [S] Function unknown |
COG ID | [COG4104] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGGTA AACCCGCAGC CCGCCTCGGC GATCCCACCG CCTGCCCGAT TCCCGGCCAC GGCACCAACC CGATCGCCGC CGGCTCGCCC GACGTGCTGT TCGACAGTCT GCCCGCCGCG CGCATGGGCG ATGCCTCCGC CTGCGGCGGC GCCATGGCCG GCGCGGTGAT TCCCAACGTG CTGATCAACG GCAAGCCGGC GGCGGTAGTG GGCAGTGTGG GCAGTCATGG CAATACCGTG GTGGCTGGCT CCGGCACCGT GTTGATCGGC GCGAGTGGCG GTGGGGCGGC GTTCAGCCCG GTTGCGCCGC TGTCGCTGGT GGCTGCTGCA GCTAGCGTCA TCAATGTTCT GGTGCCTCCG GCTCAAGCGG CCGAAGAGCG CGCGCTGGAT TACACCATTG CTTTGCAGCG TGGAGGCAAT CGTGTGCTCA CGCCTCTGCG GATTCCCGAT TACGAGGAAA TTGGACAAGG CACAACGAAC AATCGAGAGA CCATCGATTT CCAGATCCGT AACCGCAAAC AGCCGGCCGA TAGCCTGACC CTGGAGGTAT ACGATGGCGA GACGCTGCTC CATAGCGAAG CGGATACAGC GGCGCTGCTT CCGACAGGTG AGCACCAGTG GCAGTGGGAC GGCTACGACC GATCTGGCGT TCTCGATACT CGTGTTTTGA AAAGCCCCAA CCTGCTTGTG CGTCTGACCG TGAAGAAAGG TGCTGAAGAG CAGGTATCGG AGCTGCGGCT GGACAATAGC GCTGCAGCCG CACCGTGGGT CGATGCCCGC GTTGATCGCA ACGCTGGCTC CGTCGAGATC ACCCTGCGCC CCAGCTTCTC TGATGGTGGT GTATCCGGCA GGAACAACCA ATTGACGGCC CGCACATTCG ATGAACTGAA GGTATTGGCC AAGGCGGGGG TCGAATACTA CTGGTCGCGT GAGGGCAGTC GTGCAGGCGG CATCGACAAG CCGATTCAGA CAGCCAAAGG CGCGTTTCAG GTGAAGGTCA TCGCTGATGT GAATGCCAAG CCCAGCGCCA AGAATTTCCC GCTCATTGCT TCAATCGGTG ATGACTTCGG TCGTTCCACT AGTTTCGCGA TGTTCAAAAA GATTTACCAC AACTTGGGCA TGTGGGCGGC TGCCAACTAT CCCGCCAATT TTGCCGATGA GGATTTCGCG CACACCGCTG CGCATGAGGT GGGTCACCTC ATCCTCAACG AGTACGGCGA TGGTGGCTTG ATACCTGCGT ACTCGTGGAG CCACAAGTCG ACCTCCACGA TCCTCACTCA GGCGCCTGTG GACAATCACC CCATTCCAGC GGCAGGGGAG ATAGACCTTA TGCATTACCA CTCCCACAGC CCACGCAACT ACCAGGACTA TTGGCAGCGT TCCATCGCCT CGGAGAACGA CGTCAAGGGC CTGTTGTGGC TTACCCGGGT GAAATTCGAT GACTAA
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Protein sequence | MSGKPAARLG DPTACPIPGH GTNPIAAGSP DVLFDSLPAA RMGDASACGG AMAGAVIPNV LINGKPAAVV GSVGSHGNTV VAGSGTVLIG ASGGGAAFSP VAPLSLVAAA ASVINVLVPP AQAAEERALD YTIALQRGGN RVLTPLRIPD YEEIGQGTTN NRETIDFQIR NRKQPADSLT LEVYDGETLL HSEADTAALL PTGEHQWQWD GYDRSGVLDT RVLKSPNLLV RLTVKKGAEE QVSELRLDNS AAAAPWVDAR VDRNAGSVEI TLRPSFSDGG VSGRNNQLTA RTFDELKVLA KAGVEYYWSR EGSRAGGIDK PIQTAKGAFQ VKVIADVNAK PSAKNFPLIA SIGDDFGRST SFAMFKKIYH NLGMWAAANY PANFADEDFA HTAAHEVGHL ILNEYGDGGL IPAYSWSHKS TSTILTQAPV DNHPIPAAGE IDLMHYHSHS PRNYQDYWQR SIASENDVKG LLWLTRVKFD D
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