| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0053 |
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| Symbol | |
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| ID | 5106238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 49240 |
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| End bp | 50553 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640501269 |
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| Product | sun protein |
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| Protein accession | YP_001185559 |
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| Protein GI | 146305094 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCAC GTCTGGCTGC GGCGCGTGCC CTGACCGCCG TGCTGTCCGG CAAGGCCTCG
CTGGGCAGCA GCCTGCCGCC GCAACTGGAC AAGGTCGAAC ACCACGACCG CGCCCTGGCG
CAGGACCTGG CCTTCGGCGC CGCACGCTGG CAACCGCGCC TGCAACTGCT GGCCGACAAG
CTGCTGGAAA AGCCCTTCAA GGCCGCCGAC AAGGATGTCG AGGCGCTGCT GCTGATCGGT
CTCTATCAGT TGCTGCACAG CCGCATCCCC GAGCACGCCG CCATCGGCGA GACGGTCGGC
TGCGCCGGCG CGCTGAAAAA GCCCTGGGCC AAGGGCCTGC TCAACGCCGT GTTGCGCCGC
GCCCAACGCG AGCACGAAGC CCTGTTCGCA GAGCTGGATC GCGACCCGGT GCTGCACACC
GCGCATCCAC GCTGGCTGCA AAAACAGCTC AAGTCCTTCT GGCCAGAGTA TTGGCAGGCC
ATCTGCGCCG CCAACAACGC CCATCCGCCG CTGATCCTGC GGGTCAATCG CCGCCATGGC
AGCCGCGACG CCTACCTCGA GGAGCTGCGC GGCGCCGGCT TTGCCGCCGA ACCTTGCACT
TTCAGCCGCG ACGGCGTGCG CCTGCTGCAG CCCTGCGACG TGACCGCACT GCCCGGCTTC
CGGGAAGGCC GCGTCAGCGT GCAGGACGAG GCCGCGCAAC TGGCCGCCGA CCTGCTCGAG
CTGGCCCCGG GTCAACGGGT GCTGGACGCC TGCGCCGCGC CCGGCGGCAA GACCTGCCAC
CTGCTGGAAG CCGAACCGGC GCTGGCCGAA GTGATCGCGG TGGATCTGGA AGAAAAGCGC
CTGACCCGTG TACGCGAGAA TCTCCAGCGC CTCGGCCTGG AGGCGCGCCT GATCGCCGCC
GACGGCCGTG CGACCAAGGT CTGGTGGGAC GGCACGCCAT TCCAGCGCAT CCTCCTCGAT
GCACCCTGCT CGGCTACCGG GGTGATCCGC CGTCATCCGG ATATCAAGCT GACGCGCAAA
TCCGAAGACA TCCCCGCCCT GGCGCAACTT CAAGGCGAGC TGCTCGATGC GCTGTGGCCG
ACCCTGGCGC CCGGCGGCAT CCTGCTCTAC GCCACCTGCT CGGTACTGCC GACGGAAAAC
AGCGACACCA TCGCCGCCTT CCTCGCCCGT ACGCCCGACG CGCAGGAGGT CGCCATCGGT
GGAGACTTCG GTCTGCAAGC GGCGCACGGT CGCCAGCTGC TGCCACAGCT GGACGGCCAT
GACGGCTTCT ACTATGCCAA GCTGATAAAG AGCGCTGTGC CCAGCCACAG CTAA
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| Protein sequence | MNPRLAAARA LTAVLSGKAS LGSSLPPQLD KVEHHDRALA QDLAFGAARW QPRLQLLADK
LLEKPFKAAD KDVEALLLIG LYQLLHSRIP EHAAIGETVG CAGALKKPWA KGLLNAVLRR
AQREHEALFA ELDRDPVLHT AHPRWLQKQL KSFWPEYWQA ICAANNAHPP LILRVNRRHG
SRDAYLEELR GAGFAAEPCT FSRDGVRLLQ PCDVTALPGF REGRVSVQDE AAQLAADLLE
LAPGQRVLDA CAAPGGKTCH LLEAEPALAE VIAVDLEEKR LTRVRENLQR LGLEARLIAA
DGRATKVWWD GTPFQRILLD APCSATGVIR RHPDIKLTRK SEDIPALAQL QGELLDALWP
TLAPGGILLY ATCSVLPTEN SDTIAAFLAR TPDAQEVAIG GDFGLQAAHG RQLLPQLDGH
DGFYYAKLIK SAVPSHS
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