Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plut_1958 |
Symbol | |
ID | 3745219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium luteolum DSM 273 |
Kingdom | Bacteria |
Replicon accession | NC_007512 |
Strand | + |
Start bp | 2176616 |
End bp | 2177254 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637769984 |
Product | elongation factor P |
Protein accession | YP_375843 |
Protein GI | 78187800 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
TIGRFAM ID | [TIGR00038] translation elongation factor P |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000139514 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.25468 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTATATT CACTATCTTT GATTCGGGGA TTCCAGGAGG AGGCCCCGGT ACGTAAATAT TTCACCCGAG CAATGACTTC GATCAGCAAC ATATCCAAAG GTTCCATCAT CCGATTCAAG GGGGAACCCC ATATCATGGA AAGCCTTGTA CACCGAACGC CGGGCAATCT CCGGGCATTT TATCAAGCAA GCATGCGCAA TCTCAAAAGC GGCCGAAACG TCGAGTACCG CTTCAGCGCC ACAGAGTCCG TCGATCTCAT CGTCACCGAA CGGAAGGAGT ACCAGTACCT CTATCCAGAC GGCAGCGACT TTGTCATGAT GGACAACGAA ACCTTCGACC AGATCAATGT CCCCGAATCG GCAATCGGTC CTGCAGTCCG CTTTCTCAAG GACGGTGTGA ACGCCATGAT AGTATTTTCA GATGACGGTG CCATTCTCAG CGTCGAGCTC CCGACCTTTG TCGAAGTGGA GATCACTGAG ACCAGCCCTG CCACAAAGGA CGACCGGGCC ACCAGCGGCA CCAAGACCGC GGTGATTGAA ACCGGCGCCG AGGTCAATGT TCCCATGTTT CTTCAGACCG GCAGCATCAT CCGCGTCGAC ACCCGCAGCG GGGAGTACAT TGAGCGGGTA AAAAAATAA
|
Protein sequence | MLYSLSLIRG FQEEAPVRKY FTRAMTSISN ISKGSIIRFK GEPHIMESLV HRTPGNLRAF YQASMRNLKS GRNVEYRFSA TESVDLIVTE RKEYQYLYPD GSDFVMMDNE TFDQINVPES AIGPAVRFLK DGVNAMIVFS DDGAILSVEL PTFVEVEITE TSPATKDDRA TSGTKTAVIE TGAEVNVPMF LQTGSIIRVD TRSGEYIERV KK
|
| |