| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_1618 |
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| Symbol | |
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| ID | 3744990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium luteolum DSM 273 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007512 |
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| Strand | - |
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| Start bp | 1812483 |
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| End bp | 1814243 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637769651 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_375515 |
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| Protein GI | 78187472 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.73577 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAGGA GCATGTCTGA AGGGCTTTGG CGACATAGGC AGCGATCTGC GCTTCGCGCC
ATATGGACGG TCTCGTTTTT CTTCATTCTG TTGTTCACAG CCTCATGCAG CTCCGGTCCC
GCGCGTAAAG CCGAGATGGC AGCCCGCAGT GATTCCCTTG ATGCTGTGAT GGAGCGGGAG
TTCCTGCGGG CATCATTCCT CGATGCCAGA GGCGATCACC CCGGCGCCAT CAAAGGATAC
CATGAGCTGC TCCGCCGCCA GCCCCTGAAT GCCGCGCTTT ACTTTTCAAC GGCAAAGGCC
TTTCTTTCCC TCGGGGAGCT CGATTCAGCG AGGGTGTACG CAGAGCGGTG TGCTGCATTG
AGCCCTTCCA ACCGCCATGC ACTCGGTCTG CTTGCCGATG TTTCCCATGC GATGGGCGAG
CCGAAGAGGG CGGTGCAACT ATACGGGAAG CTGGCCCATA TGGACCCCGG CAACACGGAG
CTGCTGACAT GGCTCGCCAT GGAGCACCTT GCGGCTGAAC AGCCCGCAGA GGCGCTGTCG
GTGTTCCAGC GGGTGCTGAG CCTTGATCCC GGCAATGAGA CGGCCCGTTC CCATGTGCTC
CTGCTCCAGA TCAGGATGCA ACGGTACCCG GAGGCCATCG CCTCGCTTCG GGAAATGACA
AAGGGCGGCA ACGGGGATGA ACGGCTCCGG CTCACTCTCG GCGGGTTGTA CCTTCGCACC
GGCGACTATG CCGATGCGGC CTCTACTTTC CGTGAGGCCA TTGACGCCTC GCCCGGTTTC
ATTCCCGCAT GGCTGGCACT CTTCGAGGTC TCTGTCCGTT CGAAAGATAT GATGTCGTTC
CGTTCAGACC TTCTGAGCTT CTACGATACC CTTCGTCCCG CTCTTCCGAA AAAACTCGAA
CTGACCCGGT TTTATCTTTC GGAGTCGGTA TCGGACAGCC TCTACCGCAT CCCGTCGAGA
ATCATGCTCG ATGAGACATG CCGCCGCCAT CCAGAGAGCG CTGAGGCGCT GATGCTGAGG
GGATGGGCAC GCATGCGTGC AGATGATCTG GGTGGCGCGC TAAGGGATTT CAGGGCGGCT
GTTCCGCTGG ACCAGAAAAA CAGCGACCTG CGCGAGAGCC TGGTGTCCGC TCTTCTGGTA
TCCCGGCAGT TCTCTGCCGC CCAGAGGGTC GTGCTTCGCG CCAGACGGGA TTTTCCCTCC
GAACGGCTGC GGTTCCAGAT TCTGGAGGGC TATGTGCTTT ATGAGTCTGG CAAGGCTCGC
CAGGCGGTGC CTTTGCTTGA GCAGGCGCTT CGCTCAAGGC GAATACTGGA ACGCCGTGAG
CTTCAGGAGC GGGCGCTCAG TACCCTGGCG TTTGCTTACG ATACCATGGG GGTTCCAGCC
AAAAGCATGC CGTTGTATGA GCAGTTGCTG GTTCTCGAGC CCGGCAACGC CCTTGTTCTG
AACAACCTTG CATACAGCCT CACCATAGTA GGCTCCGACC TCAAGAGAGC GCGCCAGTTG
GCCGAAGCGG CGGTGGCGAA AGAGCCCGAC AGCGGGGTTT ATCTTGACAC GCTCGGCTGG
ATCCTCTACC GTCAGGGAGA GCTTAAGGAG GCTCGTATTC GTCTTGAACG GGCAATGGAA
CTGGAGCCTC TTGAGCCTGA GATAGCCCGC CATCTCGCTG AACTCTATAG GGCTGCAGGA
GAACTGGAAA AGTCCGAAGC CATGCAGAAG AAGGCCGAAG AGCTGGAGCT GAATCGTGCT
CTTCCGCCAA CAGGATCGTG A
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| Protein sequence | MGRSMSEGLW RHRQRSALRA IWTVSFFFIL LFTASCSSGP ARKAEMAARS DSLDAVMERE
FLRASFLDAR GDHPGAIKGY HELLRRQPLN AALYFSTAKA FLSLGELDSA RVYAERCAAL
SPSNRHALGL LADVSHAMGE PKRAVQLYGK LAHMDPGNTE LLTWLAMEHL AAEQPAEALS
VFQRVLSLDP GNETARSHVL LLQIRMQRYP EAIASLREMT KGGNGDERLR LTLGGLYLRT
GDYADAASTF REAIDASPGF IPAWLALFEV SVRSKDMMSF RSDLLSFYDT LRPALPKKLE
LTRFYLSESV SDSLYRIPSR IMLDETCRRH PESAEALMLR GWARMRADDL GGALRDFRAA
VPLDQKNSDL RESLVSALLV SRQFSAAQRV VLRARRDFPS ERLRFQILEG YVLYESGKAR
QAVPLLEQAL RSRRILERRE LQERALSTLA FAYDTMGVPA KSMPLYEQLL VLEPGNALVL
NNLAYSLTIV GSDLKRARQL AEAAVAKEPD SGVYLDTLGW ILYRQGELKE ARIRLERAME
LEPLEPEIAR HLAELYRAAG ELEKSEAMQK KAEELELNRA LPPTGS
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