| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_1592 |
|---|
| Symbol | |
|---|
| ID | 3746118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium luteolum DSM 273 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007512 |
|---|
| Strand | + |
|---|
| Start bp | 1782529 |
|---|
| End bp | 1784388 |
|---|
| Gene Length | 1860 bp |
|---|
| Protein Length | 619 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637769625 |
|---|
| Product | carbamoyl-phosphate synthase, large subunit |
|---|
| Protein accession | YP_375489 |
|---|
| Protein GI | 78187446 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
|---|
| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.430094 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAC ACGCTTCCGC CCTCAGCGCC GAGGTTGCCG CACTGGCGGC GAAACTCCCT
CAGGACCGTC TCCGCAAAGC CAAGGAACAC GGTTTTTCTG ATACCCAGAT CGCCAACATA
TTCAGCACTG AGGAAGCCGT CGTGCGGCAG CTCCGCAAGC AGTACGGCCT CGACTCGGTC
TTTAAAACCG TCGACACCTG TGCTGCGGAA TTCGACGCAA AAACCCCCTA CCACTACTCC
ACCTACGACG AAGAAAACGA ATCGGTCCGT TCCGAGAATA AAAAAGTGAT CATCCTCGGC
GGCGGACCGA ACCGCATCGG CCAGGGAATC GAGTTCGACT ACTGCTGCGT GCAGGCGGTC
TTCGCCCTCA GGGAAGCCGG CTACGAGACC ATCATGGTCA ACTGCAACCC CGAAACCGTC
TCGACCGACT ACGACATCGC CGACAAGCTT TACTTCGAAC CGCTGACCTT CGAAGACACC
ATCCGCATCA TCGAGCATGA GCAGCCGCTC GGCGTCATCG TCAGCTTCGG CGGACAGACC
CCCCTGAAGC TCTCCGGCAG ACTGCACGAA GCAGGCGTAA CCATCCTCGG CACCTCTCCG
GAAGGCATTG ACCTTGCCGA AGACCGGAAG AAGTTCGGCG CCCTGCTTGA CCGCCTCAAC
ATCCCGCACC CCGAATACGG CACGGCTGTC TGCCTCGAGG AGGCCCAGGC CATCACCCGC
CGGATCGGCT ATCCGGTCCT CGTCCGTCCA AGTTACGTGC TCGGCGGCCG GGCCATGAAA
ATCATCTACA GCGACGACTC CCTGAAGGAG TACGTCGATC AGGCACTCTT CATCACTGAA
AAGTACCCGC TCCTCGTCGA CCGCTTCCTG GAAACCGCCG TCGAGTTCGA CATCGACGCC
ATTGCCGACG AGAGCGACTG CGTCATCAGC GGCATCATGC AGCATGTCGA GGCTGCAGGC
ATCCACAGCG GCGACTCCAC CTCCATCCTC CCCTACCACA ACATCAGCCC GGAGGTCATC
GCAAAGATGA AGGAGTACAC CCGCATCATG GCCCGTAACA TCAAGGTGGT CGGACTCATG
AATGTGCAGT ACGCAGTGCA GAACAACAGC GTCTATGTGA TTGAAGTCAA CCCTCGGGCC
AGCCGCACGG TGCCGTTCGT CGGCAAGGCG ACGGCCATCC CCGTCGTGAA GATCGCCACC
CGCGTCATGC TCGGCGAAAA GCTCTCGGAC CTGCGCCGCG AATTCGATCT GAAAGACTGC
GACGAACTCG GCATGAAACA CATGGCCATC AAGGAACCGG TCTTCCCCTT CTCGAAATTC
GTCAAGTCCG GCGTCTACCT CGGCCCCGAA ATGCGCTCCA CCGGAGAGGC CATGAGCCTT
GCTGAAGAGT TCCCCGAAGC GTTTGCCAAA GCCTACCAGG CGGCAAACAT GCACCTGCCG
CTCTCCGGCT CGGTGTTCAT AAGCGTCAAC GACCAGGACA AGAACCACCG CATCCTCGAC
ATCGCCCGTT CGCTGTACAG AATGGACTTC GACCTTGTCG CAACTGAAGG CACTTACCGG
TTCCTGAAGG ACAACGGCAT TGAATGCAAA ATGGTGTTCA AGGTAGGTGA AGAGGGACGG
CCGAACATTT TCGACATCAT CAAGCACGGC AAGATCAACT TCGTCATCAA CACACCGAGG
GGCGAGCAGG CACTCCACGA CGAAGAGGCC ATCGGTGCCG CCTCGGTGCT CAGCAACGTG
CCGTTCGTCA CCACCATCGA AGCCGCTGAA GCCTCCGTAC AGGCGATTGA CTGCATCCGC
CACCAGGAGT TTGGAGTGAA AAGTCTCCAG GAATACGCAT CCTATCGCAA CGCCAGATAA
|
|---|
| Protein sequence | MSTHASALSA EVAALAAKLP QDRLRKAKEH GFSDTQIANI FSTEEAVVRQ LRKQYGLDSV
FKTVDTCAAE FDAKTPYHYS TYDEENESVR SENKKVIILG GGPNRIGQGI EFDYCCVQAV
FALREAGYET IMVNCNPETV STDYDIADKL YFEPLTFEDT IRIIEHEQPL GVIVSFGGQT
PLKLSGRLHE AGVTILGTSP EGIDLAEDRK KFGALLDRLN IPHPEYGTAV CLEEAQAITR
RIGYPVLVRP SYVLGGRAMK IIYSDDSLKE YVDQALFITE KYPLLVDRFL ETAVEFDIDA
IADESDCVIS GIMQHVEAAG IHSGDSTSIL PYHNISPEVI AKMKEYTRIM ARNIKVVGLM
NVQYAVQNNS VYVIEVNPRA SRTVPFVGKA TAIPVVKIAT RVMLGEKLSD LRREFDLKDC
DELGMKHMAI KEPVFPFSKF VKSGVYLGPE MRSTGEAMSL AEEFPEAFAK AYQAANMHLP
LSGSVFISVN DQDKNHRILD IARSLYRMDF DLVATEGTYR FLKDNGIECK MVFKVGEEGR
PNIFDIIKHG KINFVINTPR GEQALHDEEA IGAASVLSNV PFVTTIEAAE ASVQAIDCIR
HQEFGVKSLQ EYASYRNAR
|
|---|
| |