| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_0381 |
|---|
| Symbol | |
|---|
| ID | 3746235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium luteolum DSM 273 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007512 |
|---|
| Strand | + |
|---|
| Start bp | 449564 |
|---|
| End bp | 451720 |
|---|
| Gene Length | 2157 bp |
|---|
| Protein Length | 718 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637768420 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_374312 |
|---|
| Protein GI | 78186269 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
|---|
| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.700678 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCT ATACTGACGA AGCTGACGTA GAGATCCTTG AGCCGAAACC GGTCAAGCTG
GCCTCGAATT TCGAGAAGAT CATTCTCGAC TTCGCCCGCC AGTCCGGCAA GTCGCTGAGC
CTGGATCTCA TCCGCAGCGC CCTTCCCCAG GGTAAGGCGC AGGCGGAGAT CGAGGACATC
CAGGACGTAG CCCGTGTCTG CGGTCTGCGG ATATATGAGC TGCCGAAGGA TGTGACGCGC
CTTGAGGATG AGGATGTTCC GGCGCTCGTG CAGCATAACG TCGACAAGTT CGTCGTCATC
ACCCGGCTTG CCGAGGGGGG ACAGGCCGAT GTGCTCGAGC CGGAGGGTTC GAAGGAGGGA
CTGAAACTCC AGGAACAGGC TTACTCCCGT AACATTGAGC GCGTCTACCG GATCGGCTTT
GATTCGGCGA GCCTCTTCAG CCGCTGGAGC TGGCTGCTCC GTCCTCTTGA GGAGAGCAAG
TGGGCTTACG GGCAGGTCTT CATTGCCGCC GTCATGACGA ACCTGCTTGC CATGACCACA
TCGATCTTCT CCATGGTGGT CTATAACCGT GTTCTGCCAA ACAACGCGAC CGAGTCGCTC
GTCGCCCTCA CCATCGGCGT GTTCATCGCC CTTGTTTTCG ATTCACTCAT CAAGATGCTC
CGCTCCTGGT TCCTCGACGG GGCGGGTTCC CGGGCTGACG TGCGCATCGG CGAGAAGCTG
TTCGAGCAGC TGGTGTCGAT AGATCTTTCG GCCAAACGCG ATTCGGTCGG AGGACTCAGC
AGCGTCATGC GCGAGTTTGA AACCCTGCGC GACTTCCTCA CCTCCGCCAC CCTTGTCGCA
CTCATCGATC TTCCCTTCGT CATCGTCTTC CTCATTGCGA TCTTTGTCAT CGGCGGCCCG
GTGGTTCTTG TTCCGGCGGT GCTGGTTATT GTGGTTGTCG CTTCCGGCCT CATCGCCCAG
CCGTTCCTCA GCAAGCTGGC CCAGGAGTCG CTTGAAGAGG GAAAGTCGAA GCAGTCGATC
CTTGTCGAGA CCATCAGCGG GCTCGAGGTG ATGAAGACCT CCATGGCGAC GCGCGAAATG
CGCAAGCGCT GGCGCGAGAG CCTGCTCGCC CAGTCGGGTT CAGCGGTCAA GTCCCGCCTC
GTCTCCCAGA TAGTCGTCAA TTTCAGTGCG TTCGCCCAGC AGATCGCCCA GGTCATGATC
ATTGTGGTCG GAGCCTACGA GGCGGCGGTG GGCAACATGA CGATGGGTGC CCTCATCGCA
GCAGTCATCC TTGCCGGTCG CGGCATGGCA CCGCTCGGCC AGATTGCCGG CCTGCTCACG
AGGCTCGTGC ATGCGAAGGC TTCATTCCTT GCTCTCGACC GCTTCATGGC GCTGCCGCTC
GACCGGCCGC CATCGACCCG ATTCCTGAAC AAGGAGAAAA TGCTCGGCAA GCTGGAGTTC
CGTCAGGTCA ATTTCGCATA CCCCGACCAG CAGCAGAACG CCCTGCAGGA CGTGTCGTTC
ACGATCCAGC CGGGTGAGCG GGTCGCTCTT CTCGGCAAGA TCGGTTCCGG CAAGAGCACG
GCCGCACGGC TCATGCTCGG ACTCTATGGG CCCTCTTCCG GTTCGGTGCT GATCGATGAT
ACCGATGTCC GCCAGATCGA CCCTTTCGAC ATCCGCCGGC ACGTTTCCTT CATTATGCAG
GACAGCTGGC TCTTTTCGGG TTCGGTGCGC GACAACATCG CTTCGGGTGC CCTCGCCGTT
TCCGACGAGG AGCTTCTTCG GGCGGCCGAG ATTGCCGGTG TCCACGATTT TCTCGGCGAC
CACCCGAACG GCTACGACCT CATGCTCCGA GAGCGGGGTG AGGGGCTCTC AGGTGGCCAG
AAACAGGCGA TTTCGCTTGC CAGGGGCCTG GTCGGGAACC GCTCCGTTTT CATCATGGAC
GAGCCGACGA GCATGATGGA TATGGGCTCG GAAACGAAGT TCGTCGAGCG GCTCTCACAG
GTGATCATCG GCAAGACGCT TGTCGTCATC ACCCACCGCA GCGCCATGCT GAAGCTTGTC
GACAGGGTGA TCATCTTCGA CAAGGGGCGC ATTATCGCCG ACGGCCCGAA ATCGATCCTC
GACCGGAAAA ACCCGGCTCC GGGAGCTCCC CCCACTGCCA TGGCGGTGAA AGGATGA
|
|---|
| Protein sequence | MTPYTDEADV EILEPKPVKL ASNFEKIILD FARQSGKSLS LDLIRSALPQ GKAQAEIEDI
QDVARVCGLR IYELPKDVTR LEDEDVPALV QHNVDKFVVI TRLAEGGQAD VLEPEGSKEG
LKLQEQAYSR NIERVYRIGF DSASLFSRWS WLLRPLEESK WAYGQVFIAA VMTNLLAMTT
SIFSMVVYNR VLPNNATESL VALTIGVFIA LVFDSLIKML RSWFLDGAGS RADVRIGEKL
FEQLVSIDLS AKRDSVGGLS SVMREFETLR DFLTSATLVA LIDLPFVIVF LIAIFVIGGP
VVLVPAVLVI VVVASGLIAQ PFLSKLAQES LEEGKSKQSI LVETISGLEV MKTSMATREM
RKRWRESLLA QSGSAVKSRL VSQIVVNFSA FAQQIAQVMI IVVGAYEAAV GNMTMGALIA
AVILAGRGMA PLGQIAGLLT RLVHAKASFL ALDRFMALPL DRPPSTRFLN KEKMLGKLEF
RQVNFAYPDQ QQNALQDVSF TIQPGERVAL LGKIGSGKST AARLMLGLYG PSSGSVLIDD
TDVRQIDPFD IRRHVSFIMQ DSWLFSGSVR DNIASGALAV SDEELLRAAE IAGVHDFLGD
HPNGYDLMLR ERGEGLSGGQ KQAISLARGL VGNRSVFIMD EPTSMMDMGS ETKFVERLSQ
VIIGKTLVVI THRSAMLKLV DRVIIFDKGR IIADGPKSIL DRKNPAPGAP PTAMAVKG
|
|---|
| |