Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plut_0196 |
Symbol | rplF |
ID | 3744790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium luteolum DSM 273 |
Kingdom | Bacteria |
Replicon accession | NC_007512 |
Strand | + |
Start bp | 195184 |
End bp | 195723 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637768234 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_374127 |
Protein GI | 78186084 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.474109 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAAGAA TAGGAAAAAT GCCCATTGCC ATCGGCAACG AGGCGAAGAT CGAGGTCAAG GGCGGTATCA TTACGGTCAC TGGCCCCAAG GGCGTCCTCG ACCAGCCGAT GGTCGAAGAA GTGAGGATTG TTGAAGAGGA TGGCAAGGTG CTGGTCCAGC GCATCAATGA CAGCAAACGG GCCCGCGCTA TGCATGGTCT TTACCGCATG CTTGTCAGCA ACATGATTCA GGGTGTCACC ACCGGGTTCA CCAGGAAACT GGAGATCGCC GGCGTTGGTT TCCGTGCTGA GATGAAGAGC GACCTGCTCG CCCTCACGCT CGGTTACTCG CACATGATCT ATTTCAAGGC TCCGGAAGGC ATTAAGATGG AGACCCCCGA TCAGGTTACG GTGCTCATCA GCGGCATCGA CAAGGCTCTC GTCGGACAGG TTGCCGCCAA GATCCGCTCA TTCCGCAAGC CCGAACCTTA CCGTGGAAAG GGCATCAAGT ACGAAGGCGA GATCATCCGC CGCAAGGAAG GCAAGGCAGC AGGCAAGTAA
|
Protein sequence | MSRIGKMPIA IGNEAKIEVK GGIITVTGPK GVLDQPMVEE VRIVEEDGKV LVQRINDSKR ARAMHGLYRM LVSNMIQGVT TGFTRKLEIA GVGFRAEMKS DLLALTLGYS HMIYFKAPEG IKMETPDQVT VLISGIDKAL VGQVAAKIRS FRKPEPYRGK GIKYEGEIIR RKEGKAAGK
|
| |