Gene Plim_4216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4216 
Symbol 
ID9140937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp5389126 
End bp5389812 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003632223 
Protein GI296124445 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.357392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCCCC GTCACCATGT GGTCATTACC GGTACAGGAC GCACCGGGAC GACCTTTCTT 
ATCGAGCTTT TGACTCATCT GGGAATCAAT ACGGGGTTTC GCCCGGAAGA CCTTTCTCGA 
CTGAAGAACG ACGTCGCCCG GGCCGGTCTG GAATATGACA TCCGTGAACC CTCCGCGCCT 
TACTTGGTCA AGAATCCCAA GTTTGCCGAG TATGCTGCCG ACGTTCTTGC CGATGCGAAC 
ATTGTCATCG AGCATGTCTT CATCCCCATG CGAGATCTGG CTGCTGCGGC AGAAAGCCGT 
CGGCATGTGA CTCGATCGGC TGTCGCGAAA ATGCCACTCC TCAAACGTGC CAAGCGGTTT 
TTTCACTCGC GAGAGTTGGC AGGAGGATTG TGGAATTCGA GCAGTCTGAA GGCAGGGGCC 
CAGGAGCAGG TGCTGCTCGC TCATCTCTAC CAGTTAGTTC TGGCCCTCGC TGATGCCAAT 
ATTCCGGTCA CTTTGATCAA GTATCCGCGT CTGGTGCATG ATGGAAGTTA TCTCTACTCC 
AAGCTCAAGC CCATCCTGAA CAACATCACC GAGGAAGATT TTCTTCGCGT CTACAATGTT 
GTCGCACAAC CAGATCTGGT TCACAAATTC TCTGACACGG ATCAATGGTC TGGTCACAGC 
TCCACAAGAT CTTCGAAGGC TGCTTGA
 
Protein sequence
MAPRHHVVIT GTGRTGTTFL IELLTHLGIN TGFRPEDLSR LKNDVARAGL EYDIREPSAP 
YLVKNPKFAE YAADVLADAN IVIEHVFIPM RDLAAAAESR RHVTRSAVAK MPLLKRAKRF 
FHSRELAGGL WNSSSLKAGA QEQVLLAHLY QLVLALADAN IPVTLIKYPR LVHDGSYLYS 
KLKPILNNIT EEDFLRVYNV VAQPDLVHKF SDTDQWSGHS STRSSKAA