Gene Plim_4048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4048 
Symbol 
ID9140768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp5201009 
End bp5202055 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content55% 
IMG OID 
Productcycloartenol synthase-like protein 
Protein accessionYP_003632058 
Protein GI296124280 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTCAGA TTTCTGAAGC TGCCACCCCT GCCGAGATCG CCGCTTCCCG GCAGAAAGCC 
ATTGCGTTTC TCAAGACATC CCAGGCCGAA GATGGAAGCT GGACAACCAA TCAGACTCCC
GGCATTACAG GGCTTGTCCT CTACGGTGCA CTGAGTGCCG GTGCCGCCGC AGACGACCCG
ATGATTGTCA AAGGCCTCAA GTATCTGGAG TCATATCGCC AGCCCGACGG CGGAATTTAC
AGCCCCAAGG CTCATCATGG GAATTACGAA ACGGCCATTT CCCTTCTGGC TTTTTCGGCA
GCGAACTCCG ATGGCAAATA CAACGATCTC ATCAAGAAAG CCGAAGCCTA TATTCGCGGT
GTGCAATGGG ATCAGTCCGA AAAGATTGAA TCCTCGGATG TGCGCTGGGG TGGTGCAGGT
TATGGGAAAA CCAACGATCG GCCCGACCTT TCGAATACAG CGTTCTTCCT CGAAGCCCTG
CAGACAGCGG GTGTGAAATC GGATGATCAG GCCGTGCAGA ACGCACTGGT GTTCCTGTCA
CGCTGCCAGA ATCTGGAATC TGAGTACAAC ACCACACCGG CAGCCGCCAA GATCAATGAC
GGTGGCTTTT ACTACACCCC CGCTCTGGGT GGCCAGTCTC AGGCGGGTAC GACTCCTGAA
GGAGGCTTGC GTTCGTACGG CAGCATGACC TACGCGGGCC TTAAGAGCAT GATTTACGCG
GGGCTTAGCA AAGACGATCC CCGTGTAAAA GCTGCGACCG AATGGATTCG CAAGTTTTAT
ACAGTGGATG AAAATCCTGG CCTGGGTGAT CAAGGGATCT ACTACTATCA CCAGGCCTTT
GCCAAAGCTT TGAACGCACT GGGAGAAGAA GTTCTCATCG ATGCCCAGGG CAAAGAGCAC
CGCTGGCGGG AAGATCTCGC GAACGCACTG ATTGGCAAAC AGCAGGCCAA CGGCAGCTGG
GTAAACAAAA ATTCCCGCTG GATGGAAGGC GACCCGAACC TCGCGACAGC CTACGCACTG
ATGGCACTGA AATACGCGAC GAAGTGA
 
Protein sequence
MAQISEAATP AEIAASRQKA IAFLKTSQAE DGSWTTNQTP GITGLVLYGA LSAGAAADDP 
MIVKGLKYLE SYRQPDGGIY SPKAHHGNYE TAISLLAFSA ANSDGKYNDL IKKAEAYIRG
VQWDQSEKIE SSDVRWGGAG YGKTNDRPDL SNTAFFLEAL QTAGVKSDDQ AVQNALVFLS
RCQNLESEYN TTPAAAKIND GGFYYTPALG GQSQAGTTPE GGLRSYGSMT YAGLKSMIYA
GLSKDDPRVK AATEWIRKFY TVDENPGLGD QGIYYYHQAF AKALNALGEE VLIDAQGKEH
RWREDLANAL IGKQQANGSW VNKNSRWMEG DPNLATAYAL MALKYATK