Gene Plim_3996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3996 
Symbol 
ID9140716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp5127655 
End bp5128587 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content53% 
IMG OID 
Product5,10-methylenetetrahydrofolate reductase 
Protein accessionYP_003632006 
Protein GI296124228 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTTT TGACGACTCC AAACGCTCTG CCGTCGACCA ATCTGCGTTC TTTATACGCC 
AGCGGACAGT TTGCCCTGTC GATCGAGATC TTTCCGCCGA AAACGGCTGA AGGTGATGCT
GCTCTCAGGC AGGCACTGCA GGAGTTTTCC ACTTACAACC CGGCTTTTGT TTCGTGTACT
TACGGAGCCG GTGGTTCGAC TCGAAGCCGG ACACTCGACT GGTGCCGTGA GATTATCGAT
CGGGTGGGTG TAGCACCGAC GGCTCACTTT ACCTGTGTGG GAAGCAACAG TGACGAACTG
ATTGACTGGC TCGGTCAGGC ATGGCAACTG GGCGTGCGGA ACATCATGGC TTTGCGTGGA
GATGTTCCTC AAGGCGAAAC TGAATTCAAG GCTGTGGAAG GAGGATTCAG CCACGCCCGC
CAGCTTGTGG AACTCATTCG AAAAGAGTTT CCCGAGATGG GAATTGGCGT AGCCGGCTAT
CCCGAAAAAC ATCCTGAAGC CGTCTCGCTG GAAACAGATA TCGCCTTCCT GAAAGAAAAG
ATTACCGTCG GTGGTCATGC CGTTTTTACG CAGCTGTTTT ACGACAATGA AACTTTCTAT
CGCTACTGGG AAATGTGCCT CAAGCAGGGC ATTGATGCAC CGATCATCCC GGGAGTCATG
CCGATCACTG AGTATTCCCG GGTGAAGCGT ATTGTCGAAA TCAGCGGCAC CAAAGTTCCT
GCTGAACTGC TTGAACAGCT GGAAGCTGCA CATCTCCGCG ATGACAAAGC CGCCCAACTG
GAAATCGGGA TCGAGTATTC CGTGCAGCAA TGTCAGGATC TGATCGATCA TGGCGTCCCG
GGCCTGCACT TTTATGTGCT CAATAAAGCC CATGCCACCA GCCAGATTCT CCAGTCCCTT
GGTCTCAAAA ATTCAGAGAT CACCACGGGC TGA
 
Protein sequence
MTVLTTPNAL PSTNLRSLYA SGQFALSIEI FPPKTAEGDA ALRQALQEFS TYNPAFVSCT 
YGAGGSTRSR TLDWCREIID RVGVAPTAHF TCVGSNSDEL IDWLGQAWQL GVRNIMALRG
DVPQGETEFK AVEGGFSHAR QLVELIRKEF PEMGIGVAGY PEKHPEAVSL ETDIAFLKEK
ITVGGHAVFT QLFYDNETFY RYWEMCLKQG IDAPIIPGVM PITEYSRVKR IVEISGTKVP
AELLEQLEAA HLRDDKAAQL EIGIEYSVQQ CQDLIDHGVP GLHFYVLNKA HATSQILQSL
GLKNSEITTG