Gene Plim_3979 details

Gene Information

• Locus tag: Plim_3979
• ID: 9140699
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 5103345
• End bp: 5104013
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 56%
• Product: hypothetical protein
• Protein accession: YP_003631989
• Protein GI: 296124211

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.776319
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGACGCG AATCCACGCT CCACCAGCAA CTCAAACTGC TCTACGCCAA ATCGGCAGAG 
CGGCGCGAAG TACGTGTGGG CGATTACCGT GTCGATGCCA TTTCTCGCGG CACTCTCATC 
GAGATCCAGC AATCCGGTCT CTCCGCCATT CGCCACAAAA TTCAAACACT TCTCCAGGAT 
CACCGCGTTC TGGTCGTTAA ACCCATCGTG GCGACACGCA TGCTGAGAAC TCGACAGAAC 
GCTCAGAGTG AATACGCCGC CCCTCGCAAA AGTCCTTATC GCGGCTCATG GCTCGATGCG 
TTCGACGAAC TCATGCATCT CTTTCGCGTC TTTCCACATC CTCAATTGAA GATTGAACTG 
CTTCTCGTAG ATATTGAAGA AGACCGTACG CGCAAAGCCC GACATCGATT CCGGCGAGCC 
GATCATGTCG TTGATGACCG CCGCCTGCTA CAGATTCGTG AGCGCTGCCT CCTGAGGACT 
CCAGCCGATC TGGAACAACT TGTACCTCCC TTCCCTGTCG CACCGTTTAC AACAGCAGAA 
CTCGCCCTGG CATGGAACGT TCCCCGCTGG ACAGCTCAAA AGATTGCCTG GTGTTTCCGC 
ACTGTAGGAG CCTGGGCCCC CGTCGGCTTC TCAAAACGCA GCGTCCTCTA CCTGCCCCAC 
GCCGCTTAA 

 

Protein sequence

MRRESTLHQQ LKLLYAKSAE RREVRVGDYR VDAISRGTLI EIQQSGLSAI RHKIQTLLQD 
HRVLVVKPIV ATRMLRTRQN AQSEYAAPRK SPYRGSWLDA FDELMHLFRV FPHPQLKIEL 
LLVDIEEDRT RKARHRFRRA DHVVDDRRLL QIRERCLLRT PADLEQLVPP FPVAPFTTAE 
LALAWNVPRW TAQKIAWCFR TVGAWAPVGF SKRSVLYLPH AA