| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3945 |
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| Symbol | |
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| ID | 9140664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 5068400 |
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| End bp | 5070022 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | protein of unknown function DUF1080 |
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| Protein accession | YP_003631955 |
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| Protein GI | 296124177 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAGC ATCCGTGGTT TCGGTCGTTG TCGATGCGCA TTTTGGCGGC TGGTGTTCCC
TTTTTTGTCA GCCAGACGTG GGCTCCCGCA ACTCTTCAAG TTCTCGCTGA GGATGCTCAG
CCAGCATCGG CCATGAATCC GATGAACTCG GGCGCAGCTG GTCAGGAGAC GAGTGCGAAT
CCACCCGTCG AAAAGCCCAT GCCCCCCGCA CCGAATTCAC CCGTGATGAT GGTCGACGAA
GTCGTCCCAC CAGCAGTGCC CCAAGAGACA CCCACTTCAC CTACGCCTAC TTCTCCTGCA
CCAGATCAAA CCGTCGCGAA AGCATCGGAC GCGAAACAGC CTCCAAAGCA GCCTGAGCCA
AAACCACAGA GTGCAGATCA ACCGGCGGAA TCCAAAAAAT CTGAGCCAGC GAAAAAGCCA
GCGCCTCCCA AGCCGGCTCC GACCAAACCA GCCGCACCAC CCAAACCAGT CGATAAACCC
TTTCTGTCAC CGACAGGCGT GGATCTGAAA AAGGGGGCCA TCCGTGTCGA GGATGCCGGG
CCCGATTTCG CACTTCAAGG CGAATATATG GCCTGGGATT GGTCCGCTGA AAAAGGTTGG
CACTGGTTGG GAATTCAAGT CGTCGCCACG GGAGACGGGA CGTTTGAAGC GCTTGCTTAT
CCCGGCGGAT TACCCGGCAA CGGAGTCGCT GCGCGCGCCA CCATGCCCAT TGGAACTCCG
CAAATCAAAG CCGATTCGGA GTTACTGCCA ACGCTGTGGC AAGGGAGTGG CAAAGCGACT
CCGGAAGGTT TGCTGATCAC CTTCAATCAA CCTTCCGAAG GACGAAAATT CGTCACGAAA
GATGGGCAGA CCGGCCAACT CTTCAAAGGT GATGGTGCCT TGATTTCCCA GGCCGTCAAG
TGGTCAAGGA AGAGCCAACG TGAAGGAGCA CAACCGCCAG CCAATGCCGT GGTGCTGTTC
GATGGGACAG ACAACGGCCA GTTGAAAAAC TTGAAAATTT CGCCCGAAGG TCTCATGCAG
ATTGGTTCCG AAACCAAAGG GGCCTGGCAG AACTTCCATT TGCATGCAGA GTTCAAAACG
CCCTTTATGC CGTTCGCTAA AGGTCAGGCA CGGGCCAACA GCGGCTTTTA TCTACAGAAG
CGGTACGAGG TGCAGGTGCT GGATTCGTTT GGGTTGATTC CACAATTCAA CGATGCAGCT
GCCATCTATC GCAACAAAAT GCCCGACTTG AACATGTCGT TCCCGCCACT TTCCTGGCAG
ACCTATGACA TCCAGTTCCA GGCACCTCTG TTCGATGAAC AGGGAACCAA AATTCAGAAT
GGGCGACTGA CTGTCTGGCA CAACGGCATC GTGGTCCAGA ATCACGTTTC TCTGGAAAAC
AAAACCGGGG GCGGCACCAA AGAAGGGCCT GAAGCACTGC CGATTCTGTT CCAGAATCAC
GGAAACCCCG TTGAATTCCG CAATCTCTGG TTGGTGGAAT TGTCACCCCA GGTGCTGCAG
GCCAGCACAA CTCCGCCAGT GCCCACATGT TTACCAGTCG TTGCTACGCC CAACGCCTGT
GTTTCGACCA CGCCCTGTTG TCCTCCCACA AAACATCGTC GTCCGGCACG CTGCCGAAGA
TAA
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| Protein sequence | MIKHPWFRSL SMRILAAGVP FFVSQTWAPA TLQVLAEDAQ PASAMNPMNS GAAGQETSAN
PPVEKPMPPA PNSPVMMVDE VVPPAVPQET PTSPTPTSPA PDQTVAKASD AKQPPKQPEP
KPQSADQPAE SKKSEPAKKP APPKPAPTKP AAPPKPVDKP FLSPTGVDLK KGAIRVEDAG
PDFALQGEYM AWDWSAEKGW HWLGIQVVAT GDGTFEALAY PGGLPGNGVA ARATMPIGTP
QIKADSELLP TLWQGSGKAT PEGLLITFNQ PSEGRKFVTK DGQTGQLFKG DGALISQAVK
WSRKSQREGA QPPANAVVLF DGTDNGQLKN LKISPEGLMQ IGSETKGAWQ NFHLHAEFKT
PFMPFAKGQA RANSGFYLQK RYEVQVLDSF GLIPQFNDAA AIYRNKMPDL NMSFPPLSWQ
TYDIQFQAPL FDEQGTKIQN GRLTVWHNGI VVQNHVSLEN KTGGGTKEGP EALPILFQNH
GNPVEFRNLW LVELSPQVLQ ASTTPPVPTC LPVVATPNAC VSTTPCCPPT KHRRPARCRR
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