Gene Plim_3912 details

Gene Information

• Locus tag: Plim_3912
• ID: 9140630
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 5026142
• End bp: 5028247
• Gene Length: 2106 bp
• Protein Length: 701 aa
• Translation table: 11
• GC content: 53%
• Product: peptidase S9 prolyl oligopeptidase active site domain protein
• Protein accession: YP_003631922
• Protein GI: 296124144

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.529174
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCATA GCGACGTTTT CATACGACTC TCCGTACGAA CTTTATTGTG CGGGGCGATA 
TCGGTTTATC TCCTCGTCTT TACGCATGAA TTGGCTGCTC AAATCACCGA TGCACCAGAC 
TGGCAAAGCC ACGCGGAAAC TCGCTTGAAG GCGATCTACG ACCGTGGCGA ATTTCGCGCG 
AAGAATTACC GACCCACGTG GCTCCCCGAC AGTTCAGGCT TCATCATCGA GGAGATCGAT 
CCAAAGACAA AACAGGCCAC TCGATTCTTA CATGAAGCAT CCTCAGGTCA AAAGCGAGCA 
TGGCCATCTG ATGAAAAAAT GCCCGCCCCC GAAAGTGAAA GACTTTCACC CGCAGGAACT 
CATCGACTCG TCGTTCGCGA TAAAAAACTG CTTTCGATCA ATCAGGCCAA CCAGCAGGAG 
ATTCTGCTGG CAGCACCTGC TCCAGATCGA TTCGTTGCCT ATCGCGATCC CGTCTGGAGT 
CCTGATGGTT CACGCGTCCT CTTCATCGAA GCCGACTTCA CTGACGTGCG GCAACGATCA 
GTCCTCGTGC CGGGTGATTC CAGTTACCCG GGGGTTGAGA AACATCGCTT TGCCAGAGTG 
GGCGGCCCCA TCGAACAACT AAGAGTTGGC GTCGTGAATG CTGATGGCCA GCAACTTGTC 
TGGCTCCCCA TTGAGAGCCC CAGTGAAGGC ATCTACCTCG GTCAGGTCGA ATGGGCGGGC 
AACTCTCAAG AAATCCTCGT CGAAAAGTTC AGTCGCTTCC GTGATCAGCG TGAATTCCTG 
CTCGCCACCA CCACTGAGCA GATCAAAACG ATTTTCTCGG AATCAAACGA AGCCTGGGTC 
GAGTCGAGCC AAGGGAAAAA TTCCGGACTG GTATGGATTC AAGAAGGCCA GGCATTTGTC 
GTAATCACCG AAAAAGATGG CTGGCGGCAC GCCTATCGCT GCTCACGCGA TGGTAATGAA 
GTAACACTGT TGACCTCAGG AAACTACGAC CTCATCGATC GTGCTGTCAT CGACGAAAAA 
CGGAATTGGT ACTATTTCTA CGCCTCGCCC GATGACGCGA CACAAAAGTA TCTCTATCGC 
GTCCCGCTGG ATGGCTCGGG CCAGCTTCAG CGAATGACAC CGCCAGATCA GATCGGCACA 
CATAGCTATC AATTCTCACC CGATGCAACC TGGGCCATTC ATACGTATTC CACGCTGGAT 
TCACCTCCAA CGCATGAACT CATCGAAGTC GAGGGACACC GCGTGGTCAG CTCTCTCGAA 
AGCCATGACG ATCTCCGTGA ACGGATGAAG TTGATCGGTT CACGACCGGC TGAGTTTCTT 
AAACTCGACA TCGGCGAGGG GCTTGTCTTC GATGCCTGGA TGCTCAAACC CAGGGACTTT 
GATCCCTCAA AAAAGTATCC CTTGTTCATC TACGTTTATG GTGAGCCGCA TTTACAGACA 
GTCTTAAACG AATGGGGTGC CGCACAGATC GACTTCCACC GCGTGGTCGC TGATCTCGGC 
TACATCGTAG TATCAATCGA TAATCGTGGG ACGCCTGCTC CGAAAGGAGC CGCCTGGCGA 
CGCACTGTGT TCGGCTGCCT GGGATTACTT TCCACAGAAG AGCAGGAAGC TGGCTTAAAG 
GCCCTGGCCA AGGGACATCC CTTTATTGAT ACATCCCGCG TCGGCATCTG GGGTTGGAGC 
GGTGGTGGCT CCAATACACT CAATGCTCTC TTTCGTAAGC CCGATTCATA CCACGTCGGG 
ATTGCTGTCG TCCCCAAGCC ACAACCGCAT CTGTACAACG CCTGGTTCCA GGAAATCTTC 
ATGCGCACCC GTGAAGTAAA TCCCGATGGC TATCAGAAAG CCGCTGCCAT CAATTACGCC 
GATGGTCTCA AGGGAAAGCT CCTGATCATC ACAGGCTCTG GTGAAACGAA TACTCACATT 
CAGATCATCG AAGGATTGGT CGATCGGCTC ATTGCGCTGG GGAAGCCCTT CGACTACATG 
GTCTATCCTA ACCGTGATCA TGGACTGCGT GAGGGAGATG GTACGCAAGT GCACGTCCGG 
ATGCTGATTC TGAGATATCT GATGCAGAAT CTTCCGGCAG GCCCGCGACC AGCCACACAT 
CCATAA 

 

Protein sequence

MSHSDVFIRL SVRTLLCGAI SVYLLVFTHE LAAQITDAPD WQSHAETRLK AIYDRGEFRA 
KNYRPTWLPD SSGFIIEEID PKTKQATRFL HEASSGQKRA WPSDEKMPAP ESERLSPAGT 
HRLVVRDKKL LSINQANQQE ILLAAPAPDR FVAYRDPVWS PDGSRVLFIE ADFTDVRQRS 
VLVPGDSSYP GVEKHRFARV GGPIEQLRVG VVNADGQQLV WLPIESPSEG IYLGQVEWAG 
NSQEILVEKF SRFRDQREFL LATTTEQIKT IFSESNEAWV ESSQGKNSGL VWIQEGQAFV 
VITEKDGWRH AYRCSRDGNE VTLLTSGNYD LIDRAVIDEK RNWYYFYASP DDATQKYLYR 
VPLDGSGQLQ RMTPPDQIGT HSYQFSPDAT WAIHTYSTLD SPPTHELIEV EGHRVVSSLE 
SHDDLRERMK LIGSRPAEFL KLDIGEGLVF DAWMLKPRDF DPSKKYPLFI YVYGEPHLQT 
VLNEWGAAQI DFHRVVADLG YIVVSIDNRG TPAPKGAAWR RTVFGCLGLL STEEQEAGLK 
ALAKGHPFID TSRVGIWGWS GGGSNTLNAL FRKPDSYHVG IAVVPKPQPH LYNAWFQEIF 
MRTREVNPDG YQKAAAINYA DGLKGKLLII TGSGETNTHI QIIEGLVDRL IALGKPFDYM 
VYPNRDHGLR EGDGTQVHVR MLILRYLMQN LPAGPRPATH P