| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3852 |
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| Symbol | |
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| ID | 9140570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 4955482 |
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| End bp | 4960374 |
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| Gene Length | 4893 bp |
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| Protein Length | 1630 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_003631863 |
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| Protein GI | 296124085 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATGT TCTCGACAAT CACTGCCCGG CAATCAGGCA TCAAACGCCT CGAACCTGCG
TTCGTTCTGT CGGCGTTTTT CCCGTCTGTG ATGGTGGGCT TGGTGCTGTT GTTCAATTTG
AGCTGCTCGC CCGCAACATC ATGGGCTCAA GAGAACCAAC CCGCCGTACA GCCGGGCGAA
CTTTCTAATG ACAATATGAC GGTTAGCTCC GCACCAGAAA GTTCTCTTCA AGCGACGCTG
GCCCGGCAGC TTCGCCCGGA GATCTCACCA GCCACCACAC GTCAGTTGCG AGAACTGACC
AATGCTCTGC GCACTGGAAA TCGAGAGCTG TCGATTGTGA TTGCCGACCG GGTACTGGCC
ATCGATCCCA AAGCAGTCAC GACAATTTCC GAAAACAGCT CGACTTTTCA CGCCGTCTGG
CGCCTCCGGC GGGAGTGGTA CCATCAGTTG TTGCCGTATC AACAGCAGAA GTTGTTGAAA
GATTTCCAAC TCGCGGCTGA TCTGGCTTAT CGCGAGTTGC CTGTGGATGA ATCGCGGGGA
GAACGACTGC TGCAATTCTG TATGCAGTTT GACTTATCGG CCGCTGGGAT CAAGGCATGG
GAAGAACTGG CTGCCAGGGC TCGTGATCGT GGTCAGGCTG AGCTGGCAGC TTCGATTTAC
TTTGACTTGT CACAGCATCC ACTATTGAAG GTCGAGAATG TGGCCCGGCG AACGCAACTG
ATGCGAGCCA GTGGAGTGCT GAATGAACAG CCGAGTTTTG CAACTCGATC AGGGCAGCGA
GAACGTCGAG GCCATGGGCT AAGGCTCTTG AAAGAGCGTC TCAGCGACGA GATCTGGCCT
GTACAAAAAT CTGAGCAGAT AGTTCCCTCG CGCATCGAGA CAGTTCCCGA CCAGCGTGCG
GTCATGAGCA GGAGAGTGAT TGACGACGGT TCTCAGCAGC CTCATTTATG GGAAAATCGA
ACGGCTCAGG TCCGGCATTA TCTGCGATCC CGCGGGATCG CTACAGTTTC GATTTTGCAG
CCCCTGATCA CGGAAGATCT GGTGATCACA CGCGATCCAC TCAAGTTTGT GGCAATAGAT
CGACGGACTG AAAAAATTGT CTGGACTCTG CCGGCACCAT TGATCCGGAA TGAAACCTGG
GAACGCGGAG CGTTATCACT CCAGGACTGG CAAGCAATCG TGGGGCTGGA AAACTCGCAG
ACGATCTATG CCCAGATGAC TCCGGATGAT GATCGACTCT ATCTGATTGA CCGCATTCCT
TCACGCACAG ATGGTCGCCC TGCTCATCGA CTGCTCAGTG CAGTGGAGAT GACGACTGGG
AAAGTCCTCT GGCGTCTGGG GAGCCAGAGC AGTGGCTCGA CCTATCCGTT CAGCGAGACC
ATGTTTTTGG GCCCTCCACT GCTGATTGAC GATCAGCTCC TCTTTCTGAC GGAGAAAGAC
CAGAATCTCG GGTTGTATGC GGTGGATCGG GAGCATGGGC GGTTGGAGTG GTCGCTGGGT
TTAGGTCAAC TTTCCCAATC GCCGGCTGTT CATCCCGTGC TGCAAAGAAG TGCTGTCGCG
ATGGTCTGGG ATGGCACGAA CTGCATTGTC ACCACCGGCG TGGGCGAAGT GATCTCGATT
CATCTGGCTT CGCGATCGAT CGACTGGCGA GCTTCACTGC CGATTCATAC TCCGACCAGC
CCATTTCAGC GGGCCGATCT TCCGCCGGGA TATCTACCAG ATGAATGGTG GCGAAGTTGG
CGCGAAGCCA GGCTGCTCAT CTCGAACAAT GTGTTGATTG GTACTTCACC AGAATCCAAT
CAACTGTCGG CCTGGTCGCT GACTGGTCGG CAGCTCTGGT CAAAGACGGT TCCCGATGGA
GTTCTCGTGG CTGGTACGAC GAAAACCGGG CCGCTGAATC AACAGTGTGT GATCGTGGTG
ACATCGCAGG GAATCAGGGC TTATCGGCTC CATAACGGAG AGCTGATGTG GAATCGCTCC
TCGCTGCTGG CCACACATCC GGTAGCAGAC GGCTGGTGGC TTTCCGGTCG CCCTGTCCTG
CTGCAGGAAG CTGATCAACA GGCATGGCTT CTGGCACCAC TGACGAACGG TCAGAAACTT
CTGATATCGG CCACAACAGG AGAAGTTCGT GCTGTTTTTC CCGCAGAAAA CCACGAGGAA
TCAGCCGCAG CGCTTTTCAT TAAAGATCAG GAGCTGTGGT CGATCAGCCC GCAAGGATTG
ACTGTCGAAC CTCGACCTGA CTTAGTATTC ACTGCCAAAG AAAGCAGAGC CACTCAATGG
TCGCGAGCTG TCGCTCAAGG TGACTTTCAA ACAGGGTGGG AGATTCTTCA GCAACTGGCC
GATGAAGACT TGCCTTCCCA ACTGGGGCCA TTGGCTCGGA AAAAGGCCAT TGAACTTTTG
CAACAGAAAT TGTGCTGGGG AGATTTTTCC TTCCATCCAC AAGAATTCAG AGAGGTTACC
CGCAGACTCA GCGAACTGCT GGCGACGGCA CCTGATCAGC ATCTTGCGCT GCGGATTGAA
CTGGCCGGGT ACTGGCTGGC ATGTGATCTT CCTCAAGAGG CTCTCGCGAC TTTAAAGTCG
ATCTCACTCC TGCAACTTCG TGAGGCTGAT GCTCTGGAAT CTTCCGGAGC GATGACGGAA
AAATCTTTCC CGGGCCAACC ACCCGCTATG AAAAATCCTT GGGGGCCTGT GATTTCAGGC
AACGGGCCAG TGTTATCCGG CGATAGGCCA GTGTTATCCG GCGATAGGCC AGTGCAGGGC
ATCATCGATG GTGATGGGCG ACGCGGGTTC ATCGATGAGC GTGGGCAGAA GAGTCTTCTT
TCGTCAGCTC TGCAGGTTAG GCCTTCCCAC AGGGCCTTGG CAGTGGCCAT GCGAGCTTAT
CACCAGACCA CCAGAGATCG AGAAGCCAAT TCAATTCGTG GTGAGCCCAT CGATTGGCCG
GGATGGACTC ACACGTTTGC CGATTGGTGC CAGTGCGATT CGTTCGATGC AGCCGACTTC
TGGGTGGGGA CAGCACTGGG AAGCTATCTG CAAAACCACC GGCTGACTTC AGATAATTTT
CTCGCTGAAG CACAAGCTTT GGCGGACGTT GATCACCTGC GGCGAGAACT GGCTGCTCTG
GCCATGATTG AGCGATTGCA GGTGACTCCC GCAATCTCGG CCAAGTTGGC GGAAGCACCG
CTGACTTCGG TCTGGAACCA GCTTGTCGAA GACTGGAGAA AGCGCGGCCT GCTGGAGGAT
GCCAATGCCG CAGAGATGTT GAAGCACCGA TCATTAGCAC GTCTGGCGAC GAAAAGTTCT
CGTGAGCATG ACTTAACTTT GCCCAGGAAA GTTGAGCCTG TCTTGGGTGT TCCTCAAGTC
ACTCGTGAAG GTTTTGTGCT CCCTTCGATT CGAGAGCGGA ATGAAGAGGT CTATCAGTTT
CCCATACCGG CAACCTCGTG GCCGGGACTG GTTGCTGACC GTCTCGATAT TTCGTTAGCC
CGCCCGGGGA CGGCCATTCG CTTTGCTGGA GAGCATGTGG AATCGCCCTG GATCTTTGGT
CTGAAGCAAC AGGAAGAGGA TGAAATTCCG CTTTTGAGGC AGGCATGGAC ACTCCATCAG
GCGACGGGAG TGGGTCGTCT GTTGATTTTG CAGGTGGGTG CCGAAGTGAT GGCCATTCAA
CCGCTGAATG CCACCGGTGA GCCTCAGCCG CGCAAGTTAT GGTCATACGA ACTGGCGAGT
GAGAGTCGGC ATCCACTCGA TCAGTGGGTG CCGGCAGCAC AGGCGCGTCG TCATCTGGCA
GATCCGATTT CGTTTGGTGT GGCCGATCCC TACGGGAATC TGATTGGTCA GGCAAAACTG
ATCACCCCGG AATTGACCGC CTGGATTCGC GGTGCAGTGC TGGAAGTGAT CGATACAGCG
ACCGGTTTAC CACGCTGGTC GCGTGACGAC ATTCCTGCCC TGTCATTACT GGCGGGGGAT
TCTGACACCA TTGTGCTGAT TGATGTCGCT CGCGAATGGA TTTATCGACT CGATGCACTG
GATGGCACAG TACTGGAGAA ACAGGCGATG CCAGGCCGTT TTCCTGCACA GGCGACGCCG
AAGAGGCGTC AATTGAGCAG CCCAACGATT GTCGGAGAAG TTCCCCGGGG CTGGTGGATC
GAAGGCCGCT ATCTCTTTGA AGAACGGGTG GAAGCCCTTC AGCAACCCAT ACCTGAACAA
CCCATACCTG AAGGAGCAAT GGCTCAGTCT TTGCCGGCCA TACGCTATCA ATTGATCTGC
CATGATCTGG TGACGGGAGA GAATGTCTGG GTGCATGCAG CCTCACAGAT CTGCTATGCG
TTTCCGCTCG ATGCATGGAC GATGGGTTTG ATCCGCCGCA CAGATTTATC GGGAGGAGGT
GAACTGTTAT TGCTCGATCA GCAGACAGGG ATGGCGATGG CACCTGCGAT AGCCATCAGC
TTGCCGGAGA AAGTGAGCCG GATAGTGGCC ACTTTCGACA AGGATCGATT TTATGTCGGG
GCTTCAAATG GCAGCCAGAT GCGGCTGGAA GCTCCTTCGC TGCAGCTTAG GAATGGTTAT
CGACAACCTT ATCTGGCGGG TGAGATGACT GCGATTGATC GAAAAACAGG CCGGGTCATG
TGGCGGGTGG AAGTCGATCA GGAGCCCTGG CCATTGGATG TATCGCGGGC TTACCCGGTG
ATTGTCCGCT GCTGGACAAC TCCCGAAACA GCGGGGAGTC GCGGGGCTGT GGGACACCAG
AGAATTCACT GGGCGACGAC AGGCGAGATG GCAGCGGCTG ATGATGCGCT GTTTCTCAAT
GGTTATGTCA CCATCGAGGC TGGCGAAGGA GATGAGCTGA TTCTTCGTCG CGAGTTCTAT
TCGACGCGGA TCCTTCCCCC CGGAACAAAG TGA
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| Protein sequence | MSMFSTITAR QSGIKRLEPA FVLSAFFPSV MVGLVLLFNL SCSPATSWAQ ENQPAVQPGE
LSNDNMTVSS APESSLQATL ARQLRPEISP ATTRQLRELT NALRTGNREL SIVIADRVLA
IDPKAVTTIS ENSSTFHAVW RLRREWYHQL LPYQQQKLLK DFQLAADLAY RELPVDESRG
ERLLQFCMQF DLSAAGIKAW EELAARARDR GQAELAASIY FDLSQHPLLK VENVARRTQL
MRASGVLNEQ PSFATRSGQR ERRGHGLRLL KERLSDEIWP VQKSEQIVPS RIETVPDQRA
VMSRRVIDDG SQQPHLWENR TAQVRHYLRS RGIATVSILQ PLITEDLVIT RDPLKFVAID
RRTEKIVWTL PAPLIRNETW ERGALSLQDW QAIVGLENSQ TIYAQMTPDD DRLYLIDRIP
SRTDGRPAHR LLSAVEMTTG KVLWRLGSQS SGSTYPFSET MFLGPPLLID DQLLFLTEKD
QNLGLYAVDR EHGRLEWSLG LGQLSQSPAV HPVLQRSAVA MVWDGTNCIV TTGVGEVISI
HLASRSIDWR ASLPIHTPTS PFQRADLPPG YLPDEWWRSW REARLLISNN VLIGTSPESN
QLSAWSLTGR QLWSKTVPDG VLVAGTTKTG PLNQQCVIVV TSQGIRAYRL HNGELMWNRS
SLLATHPVAD GWWLSGRPVL LQEADQQAWL LAPLTNGQKL LISATTGEVR AVFPAENHEE
SAAALFIKDQ ELWSISPQGL TVEPRPDLVF TAKESRATQW SRAVAQGDFQ TGWEILQQLA
DEDLPSQLGP LARKKAIELL QQKLCWGDFS FHPQEFREVT RRLSELLATA PDQHLALRIE
LAGYWLACDL PQEALATLKS ISLLQLREAD ALESSGAMTE KSFPGQPPAM KNPWGPVISG
NGPVLSGDRP VLSGDRPVQG IIDGDGRRGF IDERGQKSLL SSALQVRPSH RALAVAMRAY
HQTTRDREAN SIRGEPIDWP GWTHTFADWC QCDSFDAADF WVGTALGSYL QNHRLTSDNF
LAEAQALADV DHLRRELAAL AMIERLQVTP AISAKLAEAP LTSVWNQLVE DWRKRGLLED
ANAAEMLKHR SLARLATKSS REHDLTLPRK VEPVLGVPQV TREGFVLPSI RERNEEVYQF
PIPATSWPGL VADRLDISLA RPGTAIRFAG EHVESPWIFG LKQQEEDEIP LLRQAWTLHQ
ATGVGRLLIL QVGAEVMAIQ PLNATGEPQP RKLWSYELAS ESRHPLDQWV PAAQARRHLA
DPISFGVADP YGNLIGQAKL ITPELTAWIR GAVLEVIDTA TGLPRWSRDD IPALSLLAGD
SDTIVLIDVA REWIYRLDAL DGTVLEKQAM PGRFPAQATP KRRQLSSPTI VGEVPRGWWI
EGRYLFEERV EALQQPIPEQ PIPEGAMAQS LPAIRYQLIC HDLVTGENVW VHAASQICYA
FPLDAWTMGL IRRTDLSGGG ELLLLDQQTG MAMAPAIAIS LPEKVSRIVA TFDKDRFYVG
ASNGSQMRLE APSLQLRNGY RQPYLAGEMT AIDRKTGRVM WRVEVDQEPW PLDVSRAYPV
IVRCWTTPET AGSRGAVGHQ RIHWATTGEM AAADDALFLN GYVTIEAGEG DELILRREFY
STRILPPGTK
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