Gene Plim_3813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3813 
Symbol 
ID9140531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4899485 
End bp4900771 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content54% 
IMG OID 
Productoxidoreductase FAD/NAD(P)-binding domain protein 
Protein accessionYP_003631824 
Protein GI296124046 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTCAT CGGCCACACT TTCGGTTGTT CGCTCGACGG CACCAGCCCT GGCAGAACAT 
GCCCAGAGTA TTACCAAGCA ATTCTATCAA CTCATGCTCA CAGAGCATCC TGAACTCTGG
GCCTATTTCA ACCCGGCTCA TCAGCAAAGC GGGCGGCAAT CCATGGCTCT TGCCAATGCG
ATTGTGGCCT ATGCGACGCA TATCGAGAAT CTGGCAGTGC TTTTGCCAGC GGTCGAACTC
ATTGCCCAGA AGCATTGCTC TCTGGGTGTT CAACCGGAGC ATTACCCGAT TGTGGGGAAG
TATCTGCTGC GGGCGATTCG CGATGTTCTG GGAGGTGCCG CGACTGATGA TGTCCTGACG
GCCTGGGGAG AAGCTTACCA GTTGCTGGCA GACATTCTGA TTGAACGTGA AGCGGCCATT
TACAGCGAGC AGCAGTCTCA ACCCGGGGGC TGGAAGGGCT ATCGTACTTT CGTAGTCGAA
CGGAAGGTTC CCGAATGCGA AACCATTACG TCGTTCTATC TGAAGCCAGC CGATCATCAG
TCTTTGCCGG AATTCAAGCC GGGGCAATAC ATTACGGTTA AGCTTCCGCC TCAAAGCAAA
GGTTTCAGAT CGTCAGAAGA AGGGGGAACT GGAGAGTTTC CACGCGGACT GCTCTCTCCT
CGCAACTACA GCCTTTCCGA TCAGCCGGGG AAGGATTACT TCCGGATCAG CGTCAAACGA
GAGGCCGCTC GTGAGGAAAT TGCTCCGGTC GATGGGCTGG TCTCCAATCA TCTGCACGAC
GGCATTCACG AAGGTGATCA TCTGGAAGTG GGCCCCCCAT GTGGCGAATT CTCCATCGAT
CCAGCCCTCG CAGCCCAGAA ACGACTTGTC TTTGTGGCGG GTGGAGTTGG AATCACGCCA
CTCCTCTCAA TGCTCAAAAC TGTGATTGCG GAACAGCCTC AACAACCAAT CCGTTTCATT
GTGCTGACGA GAAACAGCGG GTCACATTCC CATCGACAGG AACTCATCGA TCTGGCGACT
CGATGCCCAC AACTGAAACT GCATCTGCAC TACAGCCAGC CGCTGGAAAA TGATCGACAA
GAAGACGGCT TTCATACACA AGGCCCTGTC AATCAGAACC TGTTGAAGGA ACTTCTGGCC
ACGCAGGCGA CAGAGACGGA GTACTATTTC TGTGGACCTT CTGCACTGAT GCAGGAGATT
ATCTCAGCAC TTTCGGAACT GCAGATCGAT CCATCGCGAA TCCATTATGA ATTCTTTGGC
CCAAAGGTCG CGCTCACCAT CGCCTGA
 
Protein sequence
MLSSATLSVV RSTAPALAEH AQSITKQFYQ LMLTEHPELW AYFNPAHQQS GRQSMALANA 
IVAYATHIEN LAVLLPAVEL IAQKHCSLGV QPEHYPIVGK YLLRAIRDVL GGAATDDVLT
AWGEAYQLLA DILIEREAAI YSEQQSQPGG WKGYRTFVVE RKVPECETIT SFYLKPADHQ
SLPEFKPGQY ITVKLPPQSK GFRSSEEGGT GEFPRGLLSP RNYSLSDQPG KDYFRISVKR
EAAREEIAPV DGLVSNHLHD GIHEGDHLEV GPPCGEFSID PALAAQKRLV FVAGGVGITP
LLSMLKTVIA EQPQQPIRFI VLTRNSGSHS HRQELIDLAT RCPQLKLHLH YSQPLENDRQ
EDGFHTQGPV NQNLLKELLA TQATETEYYF CGPSALMQEI ISALSELQID PSRIHYEFFG
PKVALTIA