Gene Plim_3807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3807 
Symbol 
ID9140525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4891319 
End bp4892293 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content57% 
IMG OID 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_003631818 
Protein GI296124040 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCCAG TGCATCATGG CTCAATTTTC ACATCCCTGA ATCACTCCGC AGTTCTTGCA 
AGAGGTGCCC CTTTGAACCG TCGTTGGACC GCATTCTGGC TGGTTGGTGC AATTGTTGTC
ATTGGCATGG GAACAGGTCT GTTCTCATCA GGGGCCGATC TTCTGGGAGT TGATCTTCCG
GGAACGTCAC TCGCTGTGGC CCAGGAAGAA GCGGCTGCAC CAGCCGCCGG TGGTGCTGCG
GCTGATCCTG CGGCTGATAT TCTCGCTCAG CGCAAGCAGG AAAGTTTCCT CGCGTGGATG
ATTCGCGCCT CGGGTATTTT CGGCTTTCTG ATCATGCTCG TCTCGTTCGT CATGGTGGCC
CTCATCATGA TGCTGTTTCT GCAGATCCGC AAAGTGAACT ACATTCCTGC TGACTTCGTA
GAAGACTTTG AAGAAAAGCT GAACGCCCGC GATTACCCCG GTGCCTACGA ACTTGCGAAA
AGTGATGATT CATTCGTGGC CCGAGTCCTG GCAGCTGGTA TGGCTCGCCT CGCCCGTGGC
TATGAAGAAG TCGAAAACGC GATGCAGGAA GTGGGCGACG ACGAAGCCTT GGGGATGGAA
CAGAAGATCG GTTATCTGGC ATTGATTGGC TCGGTCGCAC CGATGCTCGG TCTGCTGGGA
ACTGTCCAGG GGATGGTGCT CAGCTTCCAG GTGATTGCGA CCAGTACACA GCAGCCCAAG
CCTTACGAGC TGGCCGACGG TATCGCCACG GCTCTCTTCA CGACACTGGA AGGTCTCATT
GTGGCGATCC CCGCCATTGT CGCCTTCACT GTCTATAAGA ATCGTTTTGC CCGGTTTATG
TTCGAGGCCA GTGTCATCAG CGAAGGATTG ATGAGCCGTT TCAGTGGTAT GAAACCACAA
GCGGCACCTG CTGCTCCAGC AGCCCCGGCG GCTCGTCCTG CTGCTGCGGC TCCTGCTGCC
GCCCCACAGG GCTAG
 
Protein sequence
MSPVHHGSIF TSLNHSAVLA RGAPLNRRWT AFWLVGAIVV IGMGTGLFSS GADLLGVDLP 
GTSLAVAQEE AAAPAAGGAA ADPAADILAQ RKQESFLAWM IRASGIFGFL IMLVSFVMVA
LIMMLFLQIR KVNYIPADFV EDFEEKLNAR DYPGAYELAK SDDSFVARVL AAGMARLARG
YEEVENAMQE VGDDEALGME QKIGYLALIG SVAPMLGLLG TVQGMVLSFQ VIATSTQQPK
PYELADGIAT ALFTTLEGLI VAIPAIVAFT VYKNRFARFM FEASVISEGL MSRFSGMKPQ
AAPAAPAAPA ARPAAAAPAA APQG