Gene Plim_3752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3752 
Symbol 
ID9140470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4826587 
End bp4827708 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631763 
Protein GI296123985 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.576211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATGG GTCTTGATCT TGGAACCTCG GTCTTTCGAT CTGTCCGTGC GCATGGGCGT 
GAGCTTCGAG CCCGGAGATT TCCCGCCAGT TATGCCATGA TTCCTGATCA ACCGGCCAAT
CGCCAGAAAC TGGAGCGATC CGAAGGACTG TTTGTCCCCT GTGGTGAGCA TCTGGTGGTT
CTGGGAGATG CCGCTCTGGA ATTGGCACGC AGCCGATCGC TGCCACTTTA TCCGCTGTTG
CCTGGCGGTA AGCTCGATAT GCGAGATGCA CTTTCGCGGC AGATTATGGC TGCGATGGTG
GATGCTGTAC TTCCTGAAGC GAAAACGCCG GGAGAGATCT GCTGTCTGAC GGTGCCATCG
ACGCGTATGG CAGAGACGCA GATCGCACTG AGCGGTGACT TGCTGGACGA CCAGAGTTCC
ACATTCGACT GGCCCGAACT CGATTACAGT TGCCAACTGG TGAAGCTGCG CGGCTACCAG
CCAGTCGCTG TTGGTCAGGC CTTGGCGGTC ACTCTGGCAG AACTTGTGGG TGAGAGTTTC
TGCGGAGTCA CGGCTGTCTT TGGTGCGTCT GTAACCGAAT TTGCGGTGGC CCATCAAGGG
CGAGAAATCG CCCGAGTGGT GATTCCCCGT GGTGGGGACT GGATTGATGA GCAACTCACG
ACGATGTCGA GCTCGAAAAT GAATCCACAC GAGCGAAATC CGGAGACAGA TCGAATTGAT
GCGGATGTCC GTCATCTGCT GAGTATTCAG AAGGCGCGAC ATGATCGGGA GCAGGCCTCA
CGGGCACCAT CGAATGAAGC ACATGCTTCC ATGATGGTCG AGGGGCGTTA TGCCGATCTG
TATCGACAGT TTCTGATGGC GGTTCTTTCG GAAGCTGGTC GAAGGCTGCA TCAGGTGGTG
GCACTCGCGA ACTTCCCGCA ACCGACGGTA CTGGCCTACG CGGGGGGTCT CAGCCGCGCC
ACGGGATTCC CGACCATGTT GAAAAATGCC ATGCGGCAGA TCGACTGGCC GATTGCGATT
GAGTCATATC GATCAGCCGA GCTTTCGCCC TTTGGTGTGG CTCGTGGCTG CCTGATTCAT
GCCGCCTTGG AAGAATTGGC GATCCAAAAG CCAGCCGCCT GA
 
Protein sequence
MSMGLDLGTS VFRSVRAHGR ELRARRFPAS YAMIPDQPAN RQKLERSEGL FVPCGEHLVV 
LGDAALELAR SRSLPLYPLL PGGKLDMRDA LSRQIMAAMV DAVLPEAKTP GEICCLTVPS
TRMAETQIAL SGDLLDDQSS TFDWPELDYS CQLVKLRGYQ PVAVGQALAV TLAELVGESF
CGVTAVFGAS VTEFAVAHQG REIARVVIPR GGDWIDEQLT TMSSSKMNPH ERNPETDRID
ADVRHLLSIQ KARHDREQAS RAPSNEAHAS MMVEGRYADL YRQFLMAVLS EAGRRLHQVV
ALANFPQPTV LAYAGGLSRA TGFPTMLKNA MRQIDWPIAI ESYRSAELSP FGVARGCLIH
AALEELAIQK PAA