| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3736 |
|---|
| Symbol | |
|---|
| ID | 9140454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 4801977 |
|---|
| End bp | 4803287 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | nucleotide sugar dehydrogenase |
|---|
| Protein accession | YP_003631747 |
|---|
| Protein GI | 296123969 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.894229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGG TGGTTGTAGG CACAGGGTAC GTCGGTCTGG TGACGGGCAC CTGCTTCGCC
GAAAGTGGTA ACGAAGTCAC CTGTGTCGAC ATCGACTCCG GCAAAATCGA GCGGCTCAAG
CAGGGGATCA TTCCCATCTA CGAGCCTGGC TTGACCGAAC TCGTCTTGAG AAACTCACAA
GCCGGTCGCT TGAAGTTCAC CACCGATCTT GTCTCTGTCG CTCCTGAAGC CAAATGCCTC
TTTATTGCCG TCGGAACTCC CCAGGGAGAC GATGGTTCGG CCAATCTGAC GGCTCTCTGG
AAAGTGGTCG ATCAAATTGC GCCGCATGTC GCCCGCGATG CCGTCGTGGT GATTAAAAGT
ACTGTCCCCG TCGGCACCAA TCGCCAGACC TGGGAACGGT TGAAAGAAAA AGCCGGTCGC
GAGATCGATG TCTGCTCGAA CCCGGAGTTT CTGAAAGAAG GCTGTGCGAT CGACGACTTT
ACCCGGCCAG ATCGTGTCGT TGTGGGCGTC ACCAGACCAC CCGTCGCCGA TGTGCTGCAC
GAGCTGTATC AGCCGTTCCT GCGAACGGAA AATCCGTTTC TGGTCATGGG GCTGGAAAGT
GCAGAAATGA CGAAGTACGT CGCCAACTGC ATGCTCGCCA CCAAGATCAG CTTTATCAAT
GAGATGGCCA ATCTCTGTGA AGCCGTCAAT GCGAACGTCA ACGATGTTCG CCGGGGAATT
GGCCACGATC AGCGGATCGG TTTTCAGTTC CTCTTCCCGG GCGTCGGCTA CGGCGGTTCC
TGCTTCCCGA AAGATGTGCG CGCCCTCATT GCTGTGGCCA GTCGATTTGG GCTTCCCTCA
AAAATGCTGC ATGCTGTGGA TGAAGTGAAC AACCTCCAGA AGGAAGTTCT CTTCTCCAAA
ATCCATCAGC GATTTGGTGG TGATCTGGCC GGTAAAACCA TCGCGATCTG GGGGCTGTCG
TTCAAACCCC GCACTGATGA TATCCGCGAA GCACCGGCAC TGGTCTTGAT CGATCAACTG
CTCGCCCATG GAGCCACGAT CAAGGTGCAC GACCCCGTCG CCCATGAAAA CGTCGAAGCC
ATCTACAAAG ACCGGCTCAC CTACTGCAAA CATCACTACG ATACTCTTGA AAACGCCGAT
GCTCTGGCGA TTGTGACGGA ATGGCAGCAG TTCCGAAATC CCGATTTTGA CTACATCAAG
CATAAACTCA GACAGCCCAT CATTTTCGAT GGCCGCAATC TGTACGATCC CAAACTGATG
GCCGAACGAG GCTTCGAATA CTCGGGCATC GGCTTAAAAG CCGCCCAATA A
|
|---|
| Protein sequence | MKLVVVGTGY VGLVTGTCFA ESGNEVTCVD IDSGKIERLK QGIIPIYEPG LTELVLRNSQ
AGRLKFTTDL VSVAPEAKCL FIAVGTPQGD DGSANLTALW KVVDQIAPHV ARDAVVVIKS
TVPVGTNRQT WERLKEKAGR EIDVCSNPEF LKEGCAIDDF TRPDRVVVGV TRPPVADVLH
ELYQPFLRTE NPFLVMGLES AEMTKYVANC MLATKISFIN EMANLCEAVN ANVNDVRRGI
GHDQRIGFQF LFPGVGYGGS CFPKDVRALI AVASRFGLPS KMLHAVDEVN NLQKEVLFSK
IHQRFGGDLA GKTIAIWGLS FKPRTDDIRE APALVLIDQL LAHGATIKVH DPVAHENVEA
IYKDRLTYCK HHYDTLENAD ALAIVTEWQQ FRNPDFDYIK HKLRQPIIFD GRNLYDPKLM
AERGFEYSGI GLKAAQ
|
|---|
| |