Gene Plim_3679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3679 
Symbol 
ID9140397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4731466 
End bp4732704 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content55% 
IMG OID 
Product6-phosphogluconolactonase 
Protein accessionYP_003631690 
Protein GI296123912 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCGG CACGGAAGCT GAAAGATTTT TTCCAACAGT TGACGAACGG CGGGTTGCCT 
CTGGCTGTGT GGCTGCTGAC ATTCGCGCAG TTGATGTTTT CGATGGCGAA GCCAGCCCAG
GCACAAGAAA CCAAAACGCC CGCATTGTTC CATGTTTATT TTGGAACTTA TACCTCAGGG
ACCAGTGAAG GGATTTATCG ATCGACTTTC GATGCATCGA CGGGCGCTCT TTCGAAGCCG
GAACTGGTGG CTAAGGTGAC CAATCCTTCG TTTCTGGCGA TGCATCCGAC GAAGCCGGTG
ATTTACTGTG TGAGTGAAGT GGCCGAATCG CTGCCAGGGA GCGAAGCGGG ACGACCGACG
GGGGCTGTGA TTGCTTTTTC GCGGGAAGCG GCCAATGGTT CGCTCAAGGA ACTGGGTTGG
AAACCTTCTG GCGGAGCGGG GCCATGTCAT CTTTCGGTCG ATCTGGCGGG AAGTGCTTTG
TTTGTCGCGA ACTATGGCGG TGGCTCGGTG GCATCACTTC CTCTCAATGC GGAGGGTGTT
CCGGAAAAGC CCTCGTCGAT CATGGTGCAT GAAGGGTCGA GCATTAATAA ACAGCGGCAA
CAGAAGCCGC ATGCGCATTC GATCAATCTC GATCAGTCGA ATCGCTATGC CTTTGCGGCA
GATCTGGGTT GCGACAAGAT TTTTATCTAT CAATTCGACC CGGCGACCCG CACGCTCAAG
CCTCATGACA TTCCTTCAGC ACCTGTGGCG GCAGGTTCCG GGCCCAGGCA TTTAGCGTTT
CATCCCAATG GACGCTTTGC CTATGTGATT AATGAGCTCA CTTCGACAAT TACCGCTTTT
AAGTACGACT CGACCAAGGG AGATCTGGAG CCGATTCAGA CGGTCTCGAC TCTACCTAAA
GATGCGAACA CACCTGGCAA TTCGACGGCA GAGATTGTGG CCCATCCTTC GGGGAACTGG
CTGGTGGGAT CGAATCGCGG TCATGACAGT CTGGCACTCT TCAGTATTCG GCCAGAGACG
GGCGAATTGA AGCTGGTGGC CAATGTTCCC GCTGGTGGAA AGACACCCAG AAACTTTGCG
TTCGATCCGA CGGGCCAATG GCTCATCGCG GCTCACCAGG GGAGCAACAG CGTGCAGGTC
TTTGCGTTCA ACGCCTCGAC AGGCACATTG ACCCCGCAGG GAGAACCTGT GGCGATTGGT
GCTCCGGTCT GTGTGCGGTT TGTCCCAATC AAGCCTTGA
 
Protein sequence
MSAARKLKDF FQQLTNGGLP LAVWLLTFAQ LMFSMAKPAQ AQETKTPALF HVYFGTYTSG 
TSEGIYRSTF DASTGALSKP ELVAKVTNPS FLAMHPTKPV IYCVSEVAES LPGSEAGRPT
GAVIAFSREA ANGSLKELGW KPSGGAGPCH LSVDLAGSAL FVANYGGGSV ASLPLNAEGV
PEKPSSIMVH EGSSINKQRQ QKPHAHSINL DQSNRYAFAA DLGCDKIFIY QFDPATRTLK
PHDIPSAPVA AGSGPRHLAF HPNGRFAYVI NELTSTITAF KYDSTKGDLE PIQTVSTLPK
DANTPGNSTA EIVAHPSGNW LVGSNRGHDS LALFSIRPET GELKLVANVP AGGKTPRNFA
FDPTGQWLIA AHQGSNSVQV FAFNASTGTL TPQGEPVAIG APVCVRFVPI KP