| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3544 |
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| Symbol | |
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| ID | 9140262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 4576607 |
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| End bp | 4577473 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_003631556 |
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| Protein GI | 296123778 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.08959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTGA AAATCTTCCT TTCGGATCGC CTGGTTGACG AGGCCGATGC CAAAGTCAGT
GTCTTCGATC ACGGTTTGCT CTATGGCGAC GGCGTCTTCG AGGGGATTCG GGTTTACGGC
GGCAAAGTCT TCCTGCACGA CGAACACATC GAACGCCTCT ACGAAAGTGC TCGCGCCATT
CGTCTCGTCA TCCCCATGGA AGCGGCTGCC TTGAAGAAGG CGGTCGAAGA GACTGTCGCC
GCCAACAACC TTTCGGATGG CTACATTCGT CTGGTCGTCA CCCGTGGTGC AGGGAGCCTG
GGCCTCGATA TTCGCAAGAC GTCGAATCCG CAGGTGATCA TCATTGCCGA TACGATCACG
ATGTACCCTC CCGAGACCTA CACGAATGGC ATGAAGCTGG TGACCGCCAG CACCATTCGT
AATCATCCCG GTGCTCTCAG CCCGCGGATC AAATCACTCA ATTATCTCAA CAACATCATG
GCCCGTATTG AAGGGACAGA TGCCGGCATG GTCGAAGCGC TGATGCTCAA CCATAAAGGC
GAGGTCGCCG AATGCACGGG CGATAACATC TTCATCATCA AGAAGGGAGT CCTGCTGACT
CCTCCCAAGG ATGCAGGCAT TCTCGAAGGG ATTACCCGCA ATGCCGTGAT GCGCCTGGCT
CGCGAAGCGG GCTATCCTGT TAAGGAAGAA CCACTCACCC GGCACGATCT CTACGTGGCT
GACGAATGCT TCCTCACAGG GACAGCGGCC GAAGTGGTGG CTGTGGTGAG CCTCGATGGT
CGCCCGATCG GCACTGGTAA ACCCGGCCCC GTCACTAACG ACCTGCTCAA GCGATTCCAG
GAACTGACCA AAAAGGGCGG CTTCTAA
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| Protein sequence | MPLKIFLSDR LVDEADAKVS VFDHGLLYGD GVFEGIRVYG GKVFLHDEHI ERLYESARAI
RLVIPMEAAA LKKAVEETVA ANNLSDGYIR LVVTRGAGSL GLDIRKTSNP QVIIIADTIT
MYPPETYTNG MKLVTASTIR NHPGALSPRI KSLNYLNNIM ARIEGTDAGM VEALMLNHKG
EVAECTGDNI FIIKKGVLLT PPKDAGILEG ITRNAVMRLA REAGYPVKEE PLTRHDLYVA
DECFLTGTAA EVVAVVSLDG RPIGTGKPGP VTNDLLKRFQ ELTKKGGF
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